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Visualizing structure and transitions in high-dimensional biological dataKevin R. Moon, Smita Krishnaswamy, David van Dijk et al.|Nature Biotechnology|2019Cited by 1.2k
Exploring single-cell data with deep multitasking neural networksMatthew Amodio, Smita Krishnaswamy, David van Dijk et al.|Nature Methods|2019Cited by 350
Quantifying the effect of experimental perturbations at single-cell resolutionDaniel B. Burkhardt, Smita Krishnaswamy, Antonio J. Giráldez et al.|Nature Biotechnology|2021Cited by 230
MAGIC: A diffusion-based imputation method reveals gene-gene interactions in single-cell RNA-sequencing dataDavid van Dijk, Dana Pe’er, Juozas Nainys et al.|bioRxiv (Cold Spring Harbor Laboratory)|2017Cited by 153