J

J. Martínez

Max Planck Institute for Heart and Lung Research

Publishes on X-ray Diffraction in Crystallography, Crystallization and Solubility Studies, Crystallography and molecular interactions. 93 papers and 73 citations.

93Publications
73Total Citations

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Top publicationsby citations

Transcriptional adaptation upregulates utrophin in Duchenne muscular dystrophy
Cited by 23Open Access

Abstract Duchenne muscular dystrophy (DMD) is a muscle-degenerating disease caused by mutations in the DMD gene, which encodes the dystrophin protein 1,2 . Utrophin ( UTRN ), the genetic and functional paralogue of DMD , is upregulated in some DMD patients 3–5 . To further investigate this UTRN upregulation, we first developed an inducible messenger RNA (mRNA) degradation system for DMD by introducing a premature termination codon (PTC) in one of its alternatively spliced exons. Inclusion of the PTC-containing exon triggers DMD mutant mRNA decay and UTRN upregulation. Notably, blocking nonsense-mediated mRNA decay results in the reversal of UTRN upregulation, whereas overexpressing DMD does not. Furthermore, overexpressing DMD PTC minigenes in wild-type cells causes UTRN upregulation, as does a wild-type DMD minigene containing a self-cleaving ribozyme. To place these findings in a therapeutic context, we used splice-switching antisense oligonucleotides (ASOs) to induce the skipping of out-of-frame exons of DMD , aiming to introduce PTCs. We found that these ASOs cause UTRN upregulation. In addition, when using an ASO to restore the DMD reading frame in myotubes derived from a DMD patient, an actual DMD treatment, UTRN upregulation was reduced. Altogether, these results indicate that an mRNA decay-based mechanism called transcriptional adaptation 6–8 plays a key role in UTRN upregulation in DMD patients, and they highlight an unexplored therapeutic application of ASOs, as well as ribozymes, in inducing genetic compensation via transcriptional adaptation.

Direct solution of the diffraction pattern of a crystal with planar faulting
E. Estevez‐Rams, J. Martínez, A. Pentón-Madrigal et al.|Physical review. B, Condensed matter|2001
Cited by 19

A direct formalism for the solution of the diffraction pattern from the faulted layer crystal is derived. The proposed method is not specific for any crystal structure. The solution avoids the need for specific planar faulting models and has a direct physical meaning. The correlation distribution function between lateral displaced layers can be directly obtained from the diffracted intensities. The solution was compared successfully to a Monte Carlo trial and error method for the fcc structure. The developed formalism was used to determine the layer-layer correlation distribution function of the ${\mathrm{Gd}}_{2}{\mathrm{Co}}_{17}$ faulted layer structure.