M1CR0B1AL1Z3R 2.0: an enhanced web server for comparative analysis of bacterial genomes at scaleYair Shimony, Tal Pupko, Edo Dotan et al.|Nucleic Acids Research|2025Cited by 8
GenomeFLTR: filtering reads made easyEdo Dotan, Tal Pupko, Michael Alburquerque et al.|Nucleic Acids Research|2023Cited by 6
BetaAlign: a deep learning approach for multiple sequence alignmentEdo Dotan, Tal Pupko, Noa Ecker et al.|Bioinformatics|2024Cited by 5
BetaAlign: a deep learning approach for multiple sequence alignmentEdo Dotan, Tal Pupko, Elya Wygoda et al.|bioRxiv (Cold Spring Harbor Laboratory)|2024Cited by 2
Efficient algorithms for simulating sequences along a phylogenetic treeElya Wygoda, Tal Pupko, Asher Moshe et al.|Bioinformatics|2025Cited by 1