Genomic epidemiology of the <i>Escherichia coli</i> O104:H4 outbreaks in Europe, 2011Yonatan H. Grad, William P. Hanage, Marc Lipsitch et al.|Proceedings of the National Academy of Sciences|2012Cited by 278
Viral dynamics of acute SARS-CoV-2 infection and applications to diagnostic and public health strategiesStephen M. Kissler, Yonatan H. Grad, Deverick J. Anderson et al.|PLoS Biology|2021Cited by 215
Comparative Genomics of Recent Shiga Toxin-Producing Escherichia coli O104:H4: Short-Term Evolution of an Emerging PathogenYonatan H. Grad, William P. Hanage, Marc Lipsitch et al.|mBio|2013Cited by 85
A generative deep learning approach to de novo antibiotic designAarti Krishnan, James J. Collins, Melis N. Anahtar et al.|Cell|2025Cited by 61
Fine-Scale Haplotype Structure Reveals Strong Signatures of Positive Selection in a Recombining Bacterial PathogenBrian Arnold, Yonatan H. Grad, Mashaal Sohail et al.|Molecular Biology and Evolution|2019Cited by 39