Discovery of a structural class of antibiotics with explainable deep learningFelix Wong, James J. Collins, Nina M. Donghia et al.|Nature|2023Cited by 409
Benchmarking AlphaFold‐enabled molecular docking predictions for antibiotic discoveryFelix Wong, James J. Collins, Aarti Krishnan et al.|Molecular Systems Biology|2022Cited by 267
Functional and Computational Genomics Reveal Unprecedented Flexibility in Stage-Specific Toxoplasma MetabolismAarti Krishnan, Dominique Soldati‐Favre, Joachim Kloehn et al.|Cell Host & Microbe|2020Cited by 115
Deep generative design of RNA aptamers using structural predictionsFelix Wong, James J. Collins, Dongchen He et al.|Nature Computational Science|2024Cited by 71
A generative deep learning approach to de novo antibiotic designAarti Krishnan, James J. Collins, Melis N. Anahtar et al.|Cell|2025Cited by 61