<i>CXCL9:SPP1</i> macrophage polarity identifies a network of cellular programs that control human cancers

Ruben Bill(University of Geneva), Pratyaksha Wirapati(University of Geneva), Marius Messemaker(Harvard University), Whijae Roh(Broad Institute), Béatrice Zitti(University of Geneva), Florent Duval(University of Geneva), Máté Kiss(University of Geneva), Jong Chul Park(Harvard University), Talia M. Saal(Harvard University), Jan Hoelzl(Harvard University), David Tarussio(Ludwig Cancer Research), Fabrizio Benedetti(Ludwig Cancer Research), Stéphanie Tissot(Ludwig Cancer Research), Lana E. Kandalaft(Ludwig Cancer Research), Marco Varrone(SIB Swiss Institute of Bioinformatics), Giovanni Ciriello(SIB Swiss Institute of Bioinformatics), Thomas McKee(University Hospital of Geneva), Yan Monnier(University Hospital of Geneva), Maxime Mermod(University Hospital of Geneva), Emily M. Blaum(Broad Institute), Irena Gushterova(Broad Institute), Anna Gonye(Broad Institute), Nir Hacohen(Broad Institute), Gad Getz(Broad Institute), Thorsten R. Mempel(Harvard University), Allon M. Klein(Harvard University), Ralph Weissleder(Harvard University), William C. Faquin(Massachusetts Eye and Ear Infirmary), Peter M. Sadow(Massachusetts Eye and Ear Infirmary), Derrick T. Lin(Massachusetts Eye and Ear Infirmary), Sara I. Pai(Broad Institute), Moshe Sade-Feldman(Broad Institute), Mikaël J. Pittet(University of Geneva)
Science
August 3, 2023
Cited by 590Open Access
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Abstract

Tumor microenvironments (TMEs) influence cancer progression but are complex and often differ between patients. Considering that microenvironment variations may reveal rules governing intratumoral cellular programs and disease outcome, we focused on tumor-to-tumor variation to examine 52 head and neck squamous cell carcinomas. We found that macrophage polarity—defined by CXCL9 and SPP1 (CS) expression but not by conventional M1 and M2 markers—had a noticeably strong prognostic association. CS macrophage polarity also identified a highly coordinated network of either pro- or antitumor variables, which involved each tumor-associated cell type and was spatially organized. We extended these findings to other cancer indications. Overall, these results suggest that, despite their complexity, TMEs coordinate coherent responses that control human cancers and for which CS macrophage polarity is a relevant yet simple variable.


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