Public health utility of cause of death data: applying empirical algorithms to improve data quality

Sarah Charlotte Johnson(University of Washington), Matthew Cunningham(University of Washington), Ilse N Dippenaar(University of Washington), Fablina Sharara(University of Washington), Eve E Wool(University of Washington), Kareha M Agesa(University of Washington), Chieh Han(University of Washington), Molly K. Miller-Petrie(University of Washington), Shadrach Wilson(University of Washington), John E Fuller(University of Washington), Shelly Balassyano(University of Washington), Gregory J Bertolacci(University of Washington), Nicole Davis Weaver(University of Washington), GBD Cause of Death Collaborators(Iran University of Medical Sciences), Jalal Arabloo(Iran University of Medical Sciences), Alaa Badawi(Public Health Agency of Canada), Akshaya Srikanth Bhagavathula(University of Washington), Katrin Burkart(University of Washington), Luis Alberto Cámera(Universidade do Porto), Félix Carvalho(Universidade do Porto), Carlos A Castañeda-Orjuela(Seoul National University Hospital), Jee-Young Jasmine Choi(Hanoi National University of Education), Dinh‐Toi Chu(Hanoi National University of Education), Xiaochen Dai(University of Washington), Mostafa Dianatinasab(Shiraz University of Medical Sciences), Sophia Emmons‐Bell(Universidade do Porto), Eduarda Fernandes(Universidade do Porto), Florian Fischer(Iran University of Medical Sciences), Ahmad Ghashghaee(Iran University of Medical Sciences), Mahaveer Golechha(University of Washington), Simon I Hay(University of Washington), Khezar Hayat(Open Data Institute), Nathaniel J Henry(Manipal Academy of Higher Education), Ramesh Holla(Manipal Academy of Higher Education), Mowafa Househ(University of Ibadan), Segun Emmanuel Ibitoye(Mashhad University of Medical Sciences), Maryam Keramati(Mashhad University of Medical Sciences), Ejaz Ahmad Khan(Xiamen University Malaysia), Yun Jin Kim(Høyskolen Kristiania), Adnan Kısa(Hamedan University of Medical Sciences), Hamidreza Komaki(Hamedan University of Medical Sciences), Ai Koyanagi(Institució Catalana de Recerca i Estudis Avançats), Samantha Leigh Larson(University of Washington), Kate E LeGrand(University of Washington), Xuefeng Liu(University of Michigan), Azeem Majeed(Imperial College London), Reza Malekzadeh(Shiraz University of Medical Sciences), Bahram Mohajer(Shahrekord University of Medical Sciences), Abdollah Mohammadian-Hafshejani(Mashhad University of Medical Sciences), Reza Mohammadpourhodki(Ahmadu Bello University), Shafiu Mohammed(Ahmadu Bello University), Farnam Mohebi(University of Washington), Ali H. Mokdad(King's College London), Mariam Molokhia(King's College London), Lorenzo Monasta(IRCCS Materno Infantile Burlo Garofolo), Mohammad Ali Moni(University of Central Punjab), Muhammad Naveed(Duy Tan University), Huong Lan Thi Nguyen(Duy Tan University), Andrew T Olagunju(University of Lagos), Samuel M Ostroff(Iran University of Medical Sciences), Fatemeh Pashazadeh Kan(Iran University of Medical Sciences), David M. Pereira(Duy Tan University), Hai Quang Pham(Duy Tan University), Salman Rawaf(Public Health England), David Laith Rawaf(Royal London Hospital), André M. N. Renzaho(Translational Research Institute), Luca Ronfani(Ain Shams University), Abdallah M Samy(Ain Shams University), Subramanian Senthilkumaran(Tehran University of Medical Sciences), Sadaf G Sepanlou(Shiraz University of Medical Sciences), Masood Ali Shaikh(University of Washington), David H. Shaw(King's College London), Kenji Shibuya(King's College London), Jasvinder A. Singh(United States Department of Veterans Affairs), Valentin Yurievich Skryabin, Anna Aleksandrovna Skryabina(University of Washington), Emma Elizabeth Spurlock(University of Washington), Eyayou Girma Tadesse(King Saud University), Mohamad‐Hani Temsah(Universidade de São Paulo), Marcos Roberto Tovani‐Palone(Universidade de São Paulo), Bach Xuan Tran(Hanoi Medical University), Gebiyaw Wudie Tsegaye(Bahir Dar University), Pascual Valdéz(JSS Academy of Higher Education and Research), Prashant M. Vishwanath(JSS Academy of Higher Education and Research), Giang Thu Vu(Foundation University Islamabad), Yasir Waheed(Foundation University Islamabad), Naohiro Yonemoto(University of Washington), Rafael Lozano(The University of Melbourne), Alan D Lopez(The University of Melbourne), Christopher J L Murray(University of Washington), Mohsen Naghavi(Institute for Health Metrics and Evaluation)
BMC Medical Informatics and Decision Making
June 2, 2021
Cited by 172Open Access
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Abstract

BACKGROUND: Accurate, comprehensive, cause-specific mortality estimates are crucial for informing public health decision making worldwide. Incorrectly or vaguely assigned deaths, defined as garbage-coded deaths, mask the true cause distribution. The Global Burden of Disease (GBD) study has developed methods to create comparable, timely, cause-specific mortality estimates; an impactful data processing method is the reallocation of garbage-coded deaths to a plausible underlying cause of death. We identify the pattern of garbage-coded deaths in the world and present the methods used to determine their redistribution to generate more plausible cause of death assignments. METHODS: We describe the methods developed for the GBD 2019 study and subsequent iterations to redistribute garbage-coded deaths in vital registration data to plausible underlying causes. These methods include analysis of multiple cause data, negative correlation, impairment, and proportional redistribution. We classify garbage codes into classes according to the level of specificity of the reported cause of death (CoD) and capture trends in the global pattern of proportion of garbage-coded deaths, disaggregated by these classes, and the relationship between this proportion and the Socio-Demographic Index. We examine the relative importance of the top four garbage codes by age and sex and demonstrate the impact of redistribution on the annual GBD CoD rankings. RESULTS: The proportion of least-specific (class 1 and 2) garbage-coded deaths ranged from 3.7% of all vital registration deaths to 67.3% in 2015, and the age-standardized proportion had an overall negative association with the Socio-Demographic Index. When broken down by age and sex, the category for unspecified lower respiratory infections was responsible for nearly 30% of garbage-coded deaths in those under 1 year of age for both sexes, representing the largest proportion of garbage codes for that age group. We show how the cause distribution by number of deaths changes before and after redistribution for four countries: Brazil, the United States, Japan, and France, highlighting the necessity of accounting for garbage-coded deaths in the GBD. CONCLUSIONS: We provide a detailed description of redistribution methods developed for CoD data in the GBD; these methods represent an overall improvement in empiricism compared to past reliance on a priori knowledge.


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