Plant Phenylacetaldehyde Synthase Is a Bifunctional Homotetrameric Enzyme That Catalyzes Phenylalanine Decarboxylation and OxidationYasuhisa Kaminaga, Jennifer Schnepp, Greg Peel et al.|Journal of Biological Chemistry|2006 We have isolated and characterized Petunia hybrida cv. Mitchell phenylacetaldehyde synthase (PAAS), which catalyzes the formation of phenylacetaldehyde, a constituent of floral scent. PAAS is a cytosolic homotetrameric enzyme that belongs to group II pyridoxal 5′-phosphate-dependent amino-acid decarboxylases and shares extensive amino acid identity (∼65%) with plant l-tyrosine/3,4-dihydroxy-l-phenylalanine and l-tryptophan decarboxylases. It displays a strict specificity for phenylalanine with an apparent Km of 1.2 mm. PAAS is a bifunctional enzyme that catalyzes the unprecedented efficient coupling of phenylalanine decarboxylation to oxidation, generating phenylacetaldehyde, CO2, ammonia, and hydrogen peroxide in stoichiometric amounts. We have isolated and characterized Petunia hybrida cv. Mitchell phenylacetaldehyde synthase (PAAS), which catalyzes the formation of phenylacetaldehyde, a constituent of floral scent. PAAS is a cytosolic homotetrameric enzyme that belongs to group II pyridoxal 5′-phosphate-dependent amino-acid decarboxylases and shares extensive amino acid identity (∼65%) with plant l-tyrosine/3,4-dihydroxy-l-phenylalanine and l-tryptophan decarboxylases. It displays a strict specificity for phenylalanine with an apparent Km of 1.2 mm. PAAS is a bifunctional enzyme that catalyzes the unprecedented efficient coupling of phenylalanine decarboxylation to oxidation, generating phenylacetaldehyde, CO2, ammonia, and hydrogen peroxide in stoichiometric amounts. Aldehydes are intermediates in a variety of biochemical pathways, including those involved in the metabolism of carbohydrates, vitamins, steroids, amino acids, benzylisoquinoline alkaloids, hormones, and lipids (1Yoshida A. Rzhetsky A. Hsu L.C. Chang C. Eur. J. Biochem. 1998; 251: 549-557Crossref PubMed Scopus (394) Google Scholar, 2Seo M. Akaba S. Oritani T. Delarue M. Bellini C. Caboche M. Koshiba T. Plant Physiol. 1998; 116: 687-693Crossref PubMed Scopus (150) Google Scholar). In plants, they are also synthesized in response to environmental stresses such as salinity, cold, and heat shock (3Bartels D. Trends Plant Sci. 2001; 6: 284-286Abstract Full Text Full Text PDF PubMed Scopus (154) Google Scholar, 4Barclay K.D. McKersies B.D. Lipids. 1994; 29: 877-882Crossref PubMed Scopus (58) Google Scholar) or as flavors and aromas in fruits and flowers (5Knudsen J.T. Tollsten L. Bergstrom G. Phytochemistry. 1993; 33: 253-280Crossref Scopus (814) Google Scholar, 6Buttery R.G. Acree T.E. Teranshi R. Flavor Science: Sensible Principles and Techniques. American Chemical Society, Washington, D. C.1993Google Scholar). For example, phenylacetaldehyde (PHA), 2The abbreviations used are: PHA, phenylacetaldehyde; PAAS, phenylacetaldehyde synthase; PLP, pyridoxal 5′-phosphate; GC-MS, gas chromatography-mass spectrometry; l-Dopa, 3,4-dihydroxy-l-phenylalanine; TYDC, l-tyrosine/3,4-dihydroxy-l-phenylalanine decarboxylase; PMP, pyridoxamine 5′-phosphate; DDC, 3,4-dihydroxyphenylalanine decarboxylase. 2-phenylethanol, and its acetate ester are important scent compounds in numerous flowers (5Knudsen J.T. Tollsten L. Bergstrom G. Phytochemistry. 1993; 33: 253-280Crossref Scopus (814) Google Scholar), including petunias (7Verdonk J.C. de Vos C.H.R. Verhoeven H.A. Haring M.A. van Tunen A.J. Schuurink R.C. Phytochemistry. 2003; 62: 997-1008Crossref PubMed Scopus (218) Google Scholar, 8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar) and roses (9Shalit M. Shafir S. Larkov O. Bar E. Kaslassi D. Adam Z. Zamir D. Vainstein A. Weiss D. Ravid U. Lewinsohn E. Isr. J. Plant Sci. 2004; 52: 245-255Crossref Scopus (28) Google Scholar). They also contribute to the aromas of tomato (6Buttery R.G. Acree T.E. Teranshi R. Flavor Science: Sensible Principles and Techniques. American Chemical Society, Washington, D. C.1993Google Scholar), grape (10Garcia E. Chacon J.L. Martinez J. Izquierdo P.M. Food Sci. Technol. Int. 2003; 9: 33-41Crossref Scopus (92) Google Scholar), and tamarind (11Pino J.A. Marbot R. Vazquez C. J. Essent. Oil Res. 2004; 16: 318-320Crossref Scopus (20) Google Scholar) fruits and to the flavor of tea (12Ravichandran R. Parthiban R. Food Chem. 1998; 62: 347-353Crossref Scopus (75) Google Scholar). PHA has been identified in some animals and fungi as well (13Deml R. Dettner K. Entomol. Gen. 1995; 19: 239-252Crossref Scopus (9) Google Scholar, 14Vuralhan Z. Morais M.A. Tai S.L. Piper M.D.W. Pronk J.T. Appl. Environ. Microbiol. 2003; 69: 4534-4541Crossref PubMed Scopus (153) Google Scholar). PHA, 2-phenylethanol, and phenylethyl acetate each contain a benzene ring with a 2-carbon side chain and are therefore referred to as C-6–C-2 compounds. The synthesis of PHA in yeast proceeds from l-phenylalanine to phenylpyruvate via transamination followed by decarboxylation (14Vuralhan Z. Morais M.A. Tai S.L. Piper M.D.W. Pronk J.T. Appl. Environ. Microbiol. 2003; 69: 4534-4541Crossref PubMed Scopus (153) Google Scholar, 15Dickinson J.R. Eshantha L. Salgado J. Hewlins M.J.E. J. Biol. Chem. 2003; 278: 8028-8034Abstract Full Text Full Text PDF PubMed Scopus (267) Google Scholar). Hazen et al. (16Hazen S.L. d'Avignon A. Anderson M.M. Hsu F.F. Heinecke J.W. J. Biol. Chem. 1998; 273: 4997-5005Abstract Full Text Full Text PDF PubMed Scopus (160) Google Scholar) postulated that oxidative decarboxylation of Phe by the myeloperoxidase-hydrogen peroxide-chlorine system can also lead to PHA. However, little is known about the biosynthesis of volatile C-6–C-2 compounds in plants. Feeding of petunia petals with deuterium (2H5)-labeled Phe results in a PHA labeling pattern consistent with synthesis from Phe via negligible pools of intermediates (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar). Moreover, 2-aminoindane phosphonate, a specific inhibitor of l-phenylalanine ammonia-lyase (EC 4.3.1.5), does not inhibit PHA synthesis but instead increases it by ∼2-fold, suggesting that the formation of PHA from Phe does not occur via trans-cinnamic acid and is in competition with trans-cinnamic acid synthesis for Phe utilization (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar). Similar labeling experiments were carried out with [2H8]Phe to determine the route to PHA and subsequent phenylethanol biosynthesis in rose petals (17Watanabe S. Hayashi K. Yagi K. Asai T. MacTavish H. Picone J. Turnbull C. Watanabe N. Biosci. Biotechnol. Biochem. 2002; 66: 943-947Crossref PubMed Scopus (47) Google Scholar, 18Hayashi S. Yagi K. Ishikawa T. Kawasaki M. Asai T. Picone J. Turnbull C. Hiratake J. Sakata K. Takada M. Ogawa K. Watanabe N. Tetrahedron. 2004; 60: 7005-7013Crossref Scopus (31) Google Scholar). A mixture of PHA isotopomers differing in hydrogen labeling (2Hor 1H) at C-1 was obtained. The occurrence of two competing pathways to PHA synthesis, one via the decarboxylation of Phe to 2-phenylethylamine followed by amine oxidation and the second via deamination of Phe to phenylpyruvate followed by its decarboxylation, as occurs in yeast, was suggested (17Watanabe S. Hayashi K. Yagi K. Asai T. MacTavish H. Picone J. Turnbull C. Watanabe N. Biosci. Biotechnol. Biochem. 2002; 66: 943-947Crossref PubMed Scopus (47) Google Scholar, 18Hayashi S. Yagi K. Ishikawa T. Kawasaki M. Asai T. Picone J. Turnbull C. Hiratake J. Sakata K. Takada M. Ogawa K. Watanabe N. Tetrahedron. 2004; 60: 7005-7013Crossref Scopus (31) Google Scholar). These two postulated pathways are shown in Fig. 1. However, to date, no enzyme activities have been demonstrated for either of the postulated pathways in plants. Here, we describe the isolation of a cDNA encoding phenylacetaldehyde synthase (PAAS) and the biochemical characterization of the recombinant protein, which catalyzes an unusual, combined decarboxylation-amine oxidation reaction, leading to the formation of PHA from Phe. Plant Material—Petunia hybrida cv. Mitchell plants (Ball Seed, West Chicago, IL) were grown under standard green-house conditions (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar). Labeling experiments were performed as described previously using corolla limbs of 2-day-old petunia flowers (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar), and emitted volatiles were collected by a closed-loop stripping method over 4 h during the day (19Donath J. Boland W. Phytochemistry. 1995; 39: 785-790Crossref Scopus (104) Google Scholar). Radiolabeled- and Stable Isotope-labeled Compounds—Deuterium-labeled l-phenylalanine (C6D5CD2CD(NH2)COOH; l-[2H8]Phe) was purchased from Cambridge Isotope Laboratories, Inc. (Andover, MA), and l-[U-14C]Tyr (434 mCi/mmol) from Amersham Biosciences. l-[U-14C]Phe (425 mCi/mmol) and sodium [14C]bicarbonate (53 mCi/mmol) were purchased from American Radiolabeled Chemicals, Inc. (St. Louis, MO). Other Reagents—All other reagents were purchased from Sigma or Aldrich. Expression of PAAS in Escherichia coli and Purification of Recombinant Protein—The coding region of petunia PAAS was amplified by PCR using forward and reverse primers (5′-ATTCATATGGATACTATCAAAATCAACCC-3′ and 5′-GGGATCCTTCTACGCATTCAGCATCATAG-3′, respectively) and subcloned into the expression vector pET-28a containing an N-terminal hexahistidine tag (Novagen, Madison, WI). The forward and reverse primers for rose PAAS were 5′-GCCCATGGGTAGCTTCCCATTCCA-3′ and 5′-GGATCCTCAATACGTGCTGAGGATTGG-3′, respectively. Sequencing revealed no errors introduced during PCR amplifications. For functional expression, E. coli BL21 Rosetta competent cells were transformed with the resulting recombinant plasmid and the pET vector without an insert as a control and grown in LB medium with 50 μg/ml at and by were performed as described previously F. N. J. Kish C.M. Dudareva N. Biochem. 2002; PubMed Scopus Google Scholar) with the the expression of PAAS was by the of to a of mm. a with at the E. coli cells were by and in containing sodium pyridoxal and The cells were with for followed by a of the by for at the enzyme in the was by The was with containing sodium and the of the from the was that of the The was from the with of the containing The with the PAAS were into PLP, and with the PAAS were by followed by of the The of the isolated was and Fig. The of the enzyme was into for of the of and for of PAAS and standard mixture PAAS and l-[U-14C]Phe in containing 50 PLP, and for at the was with of The was with of and of the was in a The were to the specific of the and of were by the method of M.M. Biochem. PubMed Scopus Google Scholar) using the and as a was performed by and gas chromatography-mass For 50 of the was a and with compounds as using as a For the enzyme was to and or of and and were in at using a and for For the mixture of PLP, and 4 of PAAS of and of coupling and of J.L. S.L. Lipids. 1993; PubMed Scopus Google Scholar). The at was at and the of was by to in the The of was using The standard mixture of of containing 50 PLP, and 4 of Laboratories, and of PAAS of The in at was at and from a Phe. The of was using the of The of was by Plant Physiol. PubMed Scopus Google Scholar). at were performed in a with and of and enzyme were performed in a were by with an that such as from the of the which was to an were by of a and at a The was from a The were and the and was by The of was by the in in the mixture with was to the method of and H. J. Biol. Chem. Full Text PDF PubMed Google Scholar). and was isolated from petunia floral petals at of and at during a and as described previously (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar). A containing the coding region of the PAAS was used as a and of PAAS Petunia of the PAAS by PCR with primers and was into P.M. Sci. U. S. A. 1998; PubMed Scopus Google Scholar) to the in the and by an The was in the vector by and of were performed as described Tunen A.J. J. PubMed Scopus Google Scholar). volatiles were collected from petunia flowers and by as described previously N. M. I. Bar E. T. N. Shafir S. Zamir D. Adam Z. Vainstein A. Weiss D. E. Lewinsohn E. Plant Physiol. 2002; PubMed Scopus Google Scholar). and Expression of Petunia and tag for hybrida cv. Mitchell (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar) and rose I. M. N. D. M. G. Bar E. O. M. M. J. Adam Z. E. Lewinsohn E. Zamir D. Vainstein A. Weiss D. Plant 2002; PubMed Scopus Google Scholar) were for involved in PHA including and amine and two one amine one and one l-tyrosine/3,4-dihydroxy-l-phenylalanine for revealed that the petunia and rose PAAS to TYDC, expression and with the of PHA in petunia and in rose flowers for rose not (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar, I. M. N. D. M. G. Bar E. O. M. M. J. Adam Z. E. Lewinsohn E. Zamir D. Vainstein A. Weiss D. Plant 2002; PubMed Scopus Google Scholar). of petunia with PAAS expression no PHA with These plants also no that PHA is a of (8Boatright J. Negre F. Chen X. Kish C.M. Wood B. Peel G. Orlova I. Gang D. Rhodes D. Dudareva N. Plant Physiol. 2004; 135: 1993-2011Crossref PubMed Scopus (335) Google Scholar). Petunia PAAS a of amino with a of and of belongs to group II amino-acid including and decarboxylases E. Eur. J. Biochem. 1994; PubMed Scopus (218) Google Scholar). It shares amino acid identity with from J. Biol. Chem. 1994; Full Text PDF PubMed Google Scholar), and H. K. D. J. Biol. Chem. 1993; Full Text PDF PubMed Google Scholar) and is to l-tryptophan decarboxylases (EC from M. Plant J. PubMed Scopus Google Scholar) and D. R. J. Plant Biol. PubMed Scopus Google Scholar) PAAS a of and is to petunia petunia rose PAAS at its suggesting cytosolic of Recombinant Petunia petunia and rose PAAS in E. coli were with amino acids, including l-Dopa, and as strict specificity for and the of by was PHA A and shown for petunia characterization of recombinant petunia PAAS revealed an apparent Km for Phe of which is to the Km of for and to Phytochemistry. 1995; PubMed Scopus Google Scholar). 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In PAAS is the enzyme to described in its catalyzes the stoichiometric oxidative decarboxylation of an acid PAAS and a two is under decarboxylation is an oxidative in the by PAAS and a in the by PAAS catalyzes a oxidative decarboxylation of acid catalyzes a decarboxylation of acid PAAS Phe as an oxidative but not as an oxidative but not utilization by PAAS under conditions is with the formation of utilization by is not with the of et al. D. M. N. Sci. U. S. A. Scopus Google Scholar) identified in tomato of the that catalyzes the decarboxylation of Phe to which is from the enzyme and can to phenylacetaldehyde the of a amine of the that in in the by We for with for with and for the of an with