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Yanfei Gao

Zhongyuan University of Technology

Publishes on Prostate Cancer Treatment and Research, Ubiquitin and proteasome pathways, Epigenetics and DNA Methylation. 72 papers and 1.3k citations.

72Publications
1.3kTotal Citations

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Top publicationsby citations

Enhancer RNAs participate in androgen receptor-driven looping that selectively enhances gene activation
Chen-Lin Hsieh, Fei Teng, Yiwen Chen et al.|Proceedings of the National Academy of Sciences|2014
Cited by 401Open Access

The androgen receptor (AR) is a key factor that regulates the behavior and fate of prostate cancer cells. The AR-regulated network is activated when AR binds enhancer elements and modulates specific enhancer-promoter looping. Kallikrein-related peptidase 3 (KLK3), which codes for prostate-specific antigen (PSA), is a well-known AR-regulated gene and its upstream enhancers produce bidirectional enhancer RNAs (eRNAs), termed KLK3e. Here, we demonstrate that KLK3e facilitates the spatial interaction of the KLK3 enhancer and the KLK2 promoter and enhances long-distance KLK2 transcriptional activation. KLK3e carries the core enhancer element derived from the androgen response element III (ARE III), which is required for the interaction of AR and Mediator 1 (Med1). Furthermore, we show that KLK3e processes RNA-dependent enhancer activity depending on the integrity of core enhancer elements. The transcription of KLK3e was detectable and its expression is significantly correlated with KLK3 (R(2) = 0.6213, P < 5 × 10(-11)) and KLK2 (R(2) = 0.5893, P < 5 × 10(-10)) in human prostate tissues. Interestingly, RNAi silencing of KLK3e resulted in a modest negative effect on prostate cancer cell proliferation. Accordingly, we report that an androgen-induced eRNA scaffolds the AR-associated protein complex that modulates chromosomal architecture and selectively enhances AR-dependent gene expression.

Lysine-Specific Demethylase 1 Has Dual Functions as a Major Regulator of Androgen Receptor Transcriptional Activity
Changmeng Cai, Housheng Hansen He, Shuai Gao et al.|Cell Reports|2014
Cited by 139Open Access

Lysine-Specific Demethylase 1 (LSD1, KDM1A) functions as a transcriptional corepressor through demethylation of histone 3 lysine 4 (H3K4) but has a coactivator function on some genes through mechanisms that are unclear. We show that LSD1, interacting with CoREST, associates with and coactivates androgen receptor (AR) on a large fraction of androgen-stimulated genes. A subset of these AR/LSD1-associated enhancer sites have histone 3 threonine 6 phosphorylation (H3T6ph), and these sites are further enriched for androgen-stimulated genes. Significantly, despite its coactivator activity, LSD1 still mediates H3K4me2 demethylation at these androgen-stimulated enhancers. FOXA1 is also associated with LSD1 at AR-regulated enhancer sites, and a FOXA1 interaction with LSD1 enhances binding of both proteins at these sites. These findings show that LSD1 functions broadly as a regulator of AR function, that it maintains a transcriptional repression function at AR-regulated enhancers through H3K4 demethylation, and that it has a distinct AR-linked coactivator function mediated by demethylation of other substrates.

Androgen Receptor Tumor Suppressor Function Is Mediated by Recruitment of Retinoblastoma Protein
Shuai Gao, Yanfei Gao, Housheng Hansen He et al.|Cell Reports|2016
Cited by 102Open Access

Although well characterized as a transcriptional activator that drives prostate cancer (PCa) growth, androgen receptor (AR) can function as a transcriptional repressor, and high-level androgens can suppress PCa proliferation. The molecular basis for this repression activity remains to be determined. Genes required for DNA replication are highly enriched among androgen-repressed genes, and AR is recruited to the majority of these genes, where it rapidly represses their transcription. This activity is enhanced in PCa cells expressing high AR levels and is mediated by recruitment of hypophosphorylated retinoblastoma protein (Rb). Significantly, AR also indirectly increases the expression of DNA replication genes through stimulatory effects on other metabolic genes with subsequent CDK activation and Rb hyperphosphorylation. In castration-resistant PCa cells, which are dependent on high-level AR expression, this anti-proliferative repression function might be exploited through treatment with androgen in combination with agents that suppress AR-driven metabolic functions or cell cycle progression.

Evaluating Urban Land Carrying Capacity Based on the Ecological Sensitivity Analysis: A Case Study in Hangzhou, China
Jin Yeu Tsou, Yanfei Gao, Yuanzhi Zhang et al.|Remote Sensing|2017
Cited by 88Open Access

Abstract: In this study, we present the evaluation of urban land carrying capacity (ULCC) based on an ecological sensitivity analysis. Remote sensing data and geographic information system (GIS) technology are employed to analyze topographic conditions, land-use types, the intensity of urban development, and ecological environmental sensitivity to create reasonable evaluation indicators to analyze urban land carrying capacity based on ecological sensitivity in the rapidly developing megacity of Hangzhou, China. In the study, ecological sensitivity is grouped into four levels: non-sensitive, lightly sensitive, moderately sensitive, and highly sensitive. The results show that the ecological sensitivity increases progressively from the center to the periphery. The results also show that ULCC is determined by ecologically sensitive levels and that the ULCC is categorized into four levels. Even though it is limited by the four levels, the ULCC still has a large margin if compared with the current population numbers. The study suggests that the urban ecological environment will continue to sustain the current population size in the short-term future. However, it is necessary to focus on the protection of distinctive natural landscapes so that decision makers can adjust measures for ecological conditions to carry out the sustainable development of populations, natural resources, and the environment in megacities like Hangzhou, China.