Model-based Analysis of ChIP-Seq (MACS)Yong Zhang, X. Shirley Liu, Tao Liu et al.|Genome biology|2008Cited by 20k
Identifying ChIP-seq enrichment using MACSJianxing Feng, Xiaole Shirley Liu, Tao Liu et al.|Nature Protocols|2012Cited by 2.1k
Cistrome: an integrative platform for transcriptional regulation studiesTao Liu, X. Shirley Liu, Jorge Ortíz et al.|Genome biology|2011Cited by 792
Cistrome Data Browser: a data portal for ChIP-Seq and chromatin accessibility data in human and mouseShenglin Mei, X. Shirley Liu, Clifford A. Meyer et al.|Nucleic Acids Research|2016Cited by 672
Comparative analysis of metazoan chromatin organizationJoshua W. K. Ho, Richard Park, Youngsook L. Jung et al.|Nature|2014Cited by 449