QIIME allows analysis of high-throughput community sequencing dataJ. Gregory Caporaso, Rob Knight, Dan Knights et al.|Nature Methods|2010Cited by 36k
PyCogent: a toolkit for making sense from sequenceRob Knight, Gavin Huttley, Amanda Birmingham et al.|Genome biology|2007Cited by 208
Human Immunodeficiency Virus <i>nef</i> Signature Sequences Are Associated with Pulmonary HypertensionSharilyn Almodóvar, Sonia C. Flores, Rob Knight et al.|AIDS Research and Human Retroviruses|2011Cited by 58
RNASTAR: An RNA STructural Alignment Repository that provides insight into the evolution of natural and artificial RNAsJeremy Widmann, Rob Knight, Jesse Stombaugh et al.|RNA|2012Cited by 39
Stable tRNA-based phylogenies using only 76 nucleotidesJeremy Widmann, Rob Knight, J. Kirk Harris et al.|RNA|2010Cited by 38