Dirichlet Multinomial Mixtures: Generative Models for Microbial MetagenomicsIan Holmes, Christopher Quince|PLoS ONE|2012Cited by 940
JBrowse: a dynamic web platform for genome visualization and analysisRobert Buels, Ian Holmes|Genome biology|2016Cited by 840
Selective State Space Models Outperform Transformers at Predicting RNA-Seq Read CoverageIan Holmes, David R. Kelley, Johannes Linder|bioRxiv (Cold Spring Harbor Laboratory)|2025Cited by 4