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Dong‐Feng Liu

University of Science and Technology of China

ORCID: 0000-0002-5954-6476

Publishes on Microbial Fuel Cells and Bioremediation, Pharmaceutical and Antibiotic Environmental Impacts, CRISPR and Genetic Engineering. 47 papers and 998 citations.

47Publications
998Total Citations

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Top publicationsby citations

Reversing Electron Transfer Chain for Light-Driven Hydrogen Production in Biotic–Abiotic Hybrid Systems
Hexing Han, Li‐Jiao Tian, Dong‐Feng Liu et al.|Journal of the American Chemical Society|2022
Cited by 147

The biotic–abiotic photosynthetic system integrating inorganic light absorbers with whole-cell biocatalysts innovates the way for sustainable solar-driven chemical transformation. Fundamentally, the electron transfer at the biotic–abiotic interface, which may induce biological response to photoexcited electron stimuli, plays an essential role in solar energy conversion. Herein, we selected an electro-active bacterium Shewanella oneidensis MR-1 as a model, which constitutes a hybrid photosynthetic system with a self-assembled CdS semiconductor, to demonstrate unique biotic–abiotic interfacial behavior. The photoexcited electrons from CdS nanoparticles can reverse the extracellular electron transfer (EET) chain within S. oneidensis MR-1, realizing the activation of a bacterial catalytic network with light illumination. As compared with bare S. oneidensis MR-1, a significant upregulation of hydrogen yield (711-fold), ATP, and reducing equivalent (NADH/NAD+) was achieved in the S. oneidensis MR-1-CdS under visible light. This work sheds light on the fundamental mechanism and provides design guidelines for biotic–abiotic photosynthetic systems.

Phthalates Promote Dissemination of Antibiotic Resistance Genes: An Overlooked Environmental Risk
Jing Wu, Zhou Jun-hua, Dong‐Feng Liu et al.|Environmental Science & Technology|2023
Cited by 99

Plastics-microorganism interactions have aroused growing environmental and ecological concerns. However, previous studies concentrated mainly on the direct interactions and paid little attention to the ecotoxicology effects of phthalates (PAEs), a common plastic additive that is continuously released and accumulates in the environment. Here, we provide insights into the impacts of PAEs on the dissemination of antibiotic resistance genes (ARGs) among environmental microorganisms. Dimethyl phthalate (DMP, a model PAE) at environmentally relevant concentrations (2-50 μg/L) significantly boosted the plasmid-mediated conjugation transfer of ARGs among intrageneric, intergeneric, and wastewater microbiota by up to 3.82, 4.96, and 4.77 times, respectively. The experimental and molecular dynamics simulation results unveil a strong interaction between the DMP molecules and phosphatidylcholine bilayer of the cell membrane, which lowers the membrane lipid fluidity and increases the membrane permeability to favor transfer of ARGs. In addition, the increased reactive oxygen species generation and conjugation-associated gene overexpression under DMP stress also contribute to the increased gene transfer. This study provides fundamental knowledge of the PAE-bacteria interactions to broaden our understanding of the environmental and ecological risks of plastics, especially in niches with colonized microbes, and to guide the control of ARG environmental spreading.

Tunable control of Cas12 activity promotes universal and fast one-pot nucleic acid detection
Zhou‐Hua Cheng, Xiyan Luo, Steven L. Yu et al.|Nature Communications|2025
Cited by 76Open Access

The CRISPR-based detection methods have been widely applied, yet they remain limited by the non-universal nature of one-pot diagnostic approaches. Here, we report a universal one-pot fluorescent method for the detection of epidemic pathogens, delivering results within 15-20 min. This method uses heparin sodium to precisely tunes the cis-cleavage capability of Cas12 via interference with the Cas12a-crRNA binding process, thereby generating significant fluorescence due to the accumulation of isothermal amplification products. Additionally, this universal assay accommodates both classic and suboptimal PAMs, as well as various Cas12a subtypes such as LbCas12a, AsCas12a, and AapCas12b. Such a robust method demonstrates sensitivity and specificity exceeding 95% in the detection of monkeypox pseudovirus, influenza A virus, and SARS-CoV-2 from saliva or wastewater samples, when compared with qPCR or RT-qPCR. Moreover, the cost of heparin sodium per thousand uses is $0.01 to $0.04 only. Collectively, this universal and fast one-pot approach based on heparin sodium offers potential possibilities for point-of-care testing. CRISPR-based detection has long been challenged by the separation of amplification and detection steps. In this study, Cheng et al., show that heparin sodium modulates Cas12 cleavage activity and apply a one pot system to detect clinical influenza A virus and SARS-CoV-2 in wastewater.

Phosphorus Recovery from Wastewater Prominently through a Fe(II)–P Oxidizing Pathway in the Autotrophic Iron-Dependent Denitrification Process
Tian Tian, Ke Zhou, Yu‐Sheng Li et al.|Environmental Science & Technology|2020
Cited by 44

Phosphorus (P) recovery from wastewater can be completed by iron-involved autotrophic denitrification via forming Fe(III)-P precipitates and/or adsorbing P onto Fe(III) oxyhydroxides. However, so far, most studies focused on the final P-containing products, while the P-capturing pathways in such a process remain unclear. In this work, autotrophic iron-dependent denitrification (AIDD) was used as a typical anoxic iron-involved P-capturing biosystem to investigate the main P recovery pathways. The AIDD biosystem showed a relatively stable capability of capturing P coupled with nitrate reduction. Direct formation of amorphous Fe(II)-P precipitates after the phosphate was fed, followed by microbially driven oxidation into Fe(III)-P minerals, was found to be the primary pathway for the P capture. In addition, adsorption of phosphate onto the formed iron oxyhydroxides also contributed to the P recovery. This work provides better understanding about recovering P in AIDD and iron-involved denitrification and highlights the important roles of iron oxidizers in the iron-related biological wastewater treatment processes.