Unsupervised protein embeddings outperform hand-crafted sequence and structure features at predicting molecular functionAmelia Villegas-Morcillo, Marcel Reinders, Stavros Makrodimitris et al.|Bioinformatics|2020Cited by 135
Automatic Gene Function Prediction in the 2020’sStavros Makrodimitris, Marcel Reinders, Roeland C. H. J. van Ham|Genes|2020Cited by 40
Improving protein function prediction using protein sequence and GO-term similaritiesStavros Makrodimitris, Marcel Reinders, Roeland C. H. J. van Ham|Bioinformatics|2018Cited by 34
Cell type deconvolution of methylated cell-free DNA at the resolution of individual readsPia Keukeleire, Marcel Reinders, Stavros Makrodimitris|NAR Genomics and Bioinformatics|2022Cited by 22
Metric learning on expression data for gene function predictionStavros Makrodimitris, Roeland C. H. J. van Ham, Marcel Reinders|Bioinformatics|2019Cited by 21