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Suzette Puente

University of California, Berkeley

Publishes on Genomics and Phylogenetic Studies, RNA and protein synthesis mechanisms, Gene Regulatory Network Analysis. 2 papers and 1.8k citations.

2Publications
1.8kTotal Citations
Genomics and Phylogenetic StudiesRNA and protein synthesis mechanismsGene Regulatory Network AnalysisGene expression and cancer classificationSingle-cell and spatial transcriptomics

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Top publicationsby citations

Differential analysis of RNA-Seq incorporating quantification uncertainty
Harold Pimentel, Bray Nicolas L., Suzette Puente et al.|bioRxiv (Cold Spring Harbor Laboratory)|2016
Cited by 77Open Access

We describe a novel method for the differential analysis of RNA-Seq data that utilizes bootstrapping in conjunction with response error linear modeling to decouple biological variance from inferential variance. The method is implemented in an interactive shiny app called sleuth that utilizes kallisto quantifications and bootstraps for fast and accurate analysis of RNA-Seq experiments.