A highly abundant bacteriophage discovered in the unknown sequences of human faecal metagenomesBas E. Dutilh, Robert A. Edwards|Nature Communications|2014Cited by 863
PhiSpy: a novel algorithm for finding prophages in bacterial genomes that combines similarity- and composition-based strategiesSajia Akhter, Robert A. Edwards|Nucleic Acids Research|2012Cited by 571
Metagenomic and Small-Subunit rRNA Analyses Reveal the Genetic Diversity of Bacteria, Archaea, Fungi, and Viruses in SoilNoah Fierer, Robert B. Jackson, Mya Breitbart et al.|Applied and Environmental Microbiology|2007Cited by 566
Marine viruses discovered via metagenomics shed light on viral strategies throughout the oceansFelipe H. Coutinho, Fabiano L. Thompson, Cynthia B. Silveira et al.|Nature Communications|2017Cited by 343
Identification and removal of ribosomal RNA sequences from metatranscriptomesRobert Schmieder, Robert A. Edwards|Bioinformatics|2011Cited by 227