MMseqs2 enables sensitive protein sequence searching for the analysis of massive data setsMartin Steinegger, Johannes Söding|Nature Biotechnology|2017Cited by 5k
HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignmentMichael Remmert, Johannes Söding|Nature Methods|2011Cited by 2.5k
Clustering huge protein sequence sets in linear timeMartin Steinegger, Johannes Söding|Nature Communications|2018Cited by 973