S

Suresh Ramakrishna

Hanyang University

ORCID: 0000-0002-4038-1085

Publishes on Ubiquitin and proteasome pathways, CRISPR and Genetic Engineering, Pluripotent Stem Cells Research. 150 papers and 4.5k citations.

150Publications
4.5kTotal Citations

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Top publicationsby citations

Gene disruption by cell-penetrating peptide-mediated delivery of Cas9 protein and guide RNA
Cited by 642Open Access

RNA-guided endonucleases (RGENs) derived from the CRISPR/Cas system represent an efficient tool for genome editing. RGENs consist of two components: Cas9 protein and guide RNA. Plasmid-mediated delivery of these components into cells can result in uncontrolled integration of the plasmid sequence into the host genome, and unwanted immune responses and potential safety problems that can be caused by the bacterial sequences. Furthermore, this delivery method requires transfection tools. Here we show that simple treatment with cell-penetrating peptide (CPP)-conjugated recombinant Cas9 protein and CPP-complexed guide RNAs leads to endogenous gene disruptions in human cell lines. The Cas9 protein was conjugated to CPP via a thioether bond, whereas the guide RNA was complexed with CPP, forming condensed, positively charged nanoparticles. Simultaneous and sequential treatment of human cells, including embryonic stem cells, dermal fibroblasts, HEK293T cells, HeLa cells, and embryonic carcinoma cells, with the modified Cas9 and guide RNA, leads to efficient gene disruptions with reduced off-target mutations relative to plasmid transfections, resulting in the generation of clones containing RGEN-induced mutations. Our CPP-mediated RGEN delivery process provides a plasmid-free and additional transfection reagent-free method to use this tool with reduced off-target effects. We envision that our method will facilitate RGEN-directed genome editing.

Advances in Deubiquitinating Enzyme Inhibition and Applications in Cancer Therapeutics
Cited by 143Open Access

Since the discovery of the ubiquitin proteasome system (UPS), the roles of ubiquitinating and deubiquitinating enzymes (DUBs) have been widely elucidated. The ubiquitination of proteins regulates many aspects of cellular functions such as protein degradation and localization, and also modifies protein-protein interactions. DUBs cleave the attached ubiquitin moieties from substrates and thereby reverse the process of ubiquitination. The dysregulation of these two paramount pathways has been implicated in numerous diseases, including cancer. Attempts are being made to identify inhibitors of ubiquitin E3 ligases and DUBs that potentially have clinical implications in cancer, making them an important target in the pharmaceutical industry. Therefore, studies in medicine are currently focused on the pharmacological disruption of DUB activity as a rationale to specifically target cancer-causing protein aberrations. Here, we briefly discuss the pathophysiological and physiological roles of DUBs in key cancer-related pathways. We also discuss the clinical applications of promising DUB inhibitors that may contribute to the development of DUBs as key therapeutic targets in the future.

Theranostic polymeric nanoparticles as a new approach in cancer therapy and diagnosis: a review
Seyed Mohammad Hosseini, Javad Mohammadnejad, S. Salamat et al.|Materials Today Chemistry|2023
Cited by 136Open Access

The theranostic term is a revolutionary topic in cancer treatment, combining therapeutic and diagnostic. Theranostic provides an opportunity for diagnosis and response assessment during treatment. Therefore, a single approach can determine an effective line of treatment. The real-time monitoring of therapeutic strategy aimed to be reached by co-delivery of imaging and pharmaceutical agents. The nanoscale carriers are promising platforms in theranostic applications. Although, it is worth bearing in mind that providing diagnosis and therapy in the same structure is troublesome. Imaging modalities are designed to improve the signal-to-noise ratio with rapid clearance. At the same time, therapeutic agents require to accumulate with high concentrations at the disease site. Moreover, the importance of biocompatibility of nanocarriers necessitates the careful design of theranostic nanostructures. Here, we present an overview of the characteristics of nanoparticles as theranostic polymeric agents in biological applications.