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Samuel G. Armato

University of Chicago

ORCID: 0000-0002-5428-7997

Publishes on Radiomics and Machine Learning in Medical Imaging, Lung Cancer Diagnosis and Treatment, Occupational and environmental lung diseases. 273 papers and 11.8k citations.

273Publications
11.8kTotal Citations

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The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI): A Completed Reference Database of Lung Nodules on CT Scans
Samuel G. Armato, Geoffrey McLennan, Luc Bidaut et al.|Medical Physics|2011
Cited by 2.8kOpen Access

PURPOSE: The development of computer-aided diagnostic (CAD) methods for lung nodule detection, classification, and quantitative assessment can be facilitated through a well-characterized repository of computed tomography (CT) scans. The Lung Image Database Consortium (LIDC) and Image Database Resource Initiative (IDRI) completed such a database, establishing a publicly available reference for the medical imaging research community. Initiated by the National Cancer Institute (NCI), further advanced by the Foundation for the National Institutes of Health (FNIH), and accompanied by the Food and Drug Administration (FDA) through active participation, this public-private partnership demonstrates the success of a consortium founded on a consensus-based process. METHODS: Seven academic centers and eight medical imaging companies collaborated to identify, address, and resolve challenging organizational, technical, and clinical issues to provide a solid foundation for a robust database. The LIDC/IDRI Database contains 1018 cases, each of which includes images from a clinical thoracic CT scan and an associated XML file that records the results of a two-phase image annotation process performed by four experienced thoracic radiologists. In the initial blinded-read phase, each radiologist independently reviewed each CT scan and marked lesions belonging to one of three categories ("nodule > or =3 mm," "nodule <3 mm," and "non-nodule > or =3 mm"). In the subsequent unblinded-read phase, each radiologist independently reviewed their own marks along with the anonymized marks of the three other radiologists to render a final opinion. The goal of this process was to identify as completely as possible all lung nodules in each CT scan without requiring forced consensus. RESULTS: The Database contains 7371 lesions marked "nodule" by at least one radiologist. 2669 of these lesions were marked "nodule > or =3 mm" by at least one radiologist, of which 928 (34.7%) received such marks from all four radiologists. These 2669 lesions include nodule outlines and subjective nodule characteristic ratings. CONCLUSIONS: The LIDC/IDRI Database is expected to provide an essential medical imaging research resource to spur CAD development, validation, and dissemination in clinical practice.

Treatment of Malignant Pleural Mesothelioma: American Society of Clinical Oncology Clinical Practice Guideline
Hedy L. Kindler, Nofisat Ismaila, Samuel G. Armato et al.|Journal of Clinical Oncology|2018
Cited by 418Open Access

Purpose To provide evidence-based recommendations to practicing physicians and others on the management of malignant pleural mesothelioma. Methods ASCO convened an Expert Panel of medical oncology, thoracic surgery, radiation oncology, pulmonary, pathology, imaging, and advocacy experts to conduct a literature search, which included systematic reviews, meta-analyses, randomized controlled trials, and prospective and retrospective comparative observational studies published from 1990 through 2017. Outcomes of interest included survival, disease-free or recurrence-free survival, and quality of life. Expert Panel members used available evidence and informal consensus to develop evidence-based guideline recommendations. Results The literature search identified 222 relevant studies to inform the evidence base for this guideline. Recommendations Evidence-based recommendations were developed for diagnosis, staging, chemotherapy, surgical cytoreduction, radiation therapy, and multimodality therapy in patients with malignant pleural mesothelioma. Additional information is available at www.asco.org/thoracic-cancer-guidelines and www.asco.org/guidelineswiki .

Lung Image Database Consortium: Developing a Resource for the Medical Imaging Research Community
Cited by 383

To stimulate the advancement of computer-aided diagnostic (CAD) research for lung nodules in thoracic computed tomography (CT), the National Cancer Institute launched a cooperative effort known as the Lung Image Database Consortium (LIDC). The LIDC is composed of five academic institutions from across the United States that are working together to develop an image database that will serve as an international research resource for the development, training, and evaluation of CAD methods in the detection of lung nodules on CT scans. Prior to the collection of CT images and associated patient data, the LIDC has been engaged in a consensus process to identify, address, and resolve a host of challenging technical and clinical issues to provide a solid foundation for a scientifically robust database. These issues include the establishment of (a) a governing mission statement, (b) criteria to determine whether a CT scan is eligible for inclusion in the database, (c) an appropriate definition of the term qualifying nodule, (d) an appropriate definition of “truth” requirements, (e) a process model through which the database will be populated, and (f) a statistical framework to guide the application of assessment methods by users of the database. Through a consensus process in which careful planning and proper consideration of fundamental issues have been emphasized, the LIDC database is expected to provide a powerful resource for the medical imaging research community. This article is intended to share with the community the breadth and depth of these key issues. © RSNA, 2004

Computerized Detection of Pulmonary Nodules on CT Scans
Cited by 377

Helical computed tomography (CT) is the most sensitive imaging modality for detection of pulmonary nodules. However, a single CT examination produces a large quantity of image data. Therefore, a computerized scheme has been developed to automatically detect pulmonary nodules on CT images. This scheme includes both two- and three-dimensional analyses. Within each section, gray-level thresholding methods are used to segment the thorax from the background and then the lungs from the thorax. A rolling ball algorithm is applied to the lung segmentation contours to avoid the loss of juxtapleural nodules. Multiple gray-level thresholds are applied to the volumetric lung regions to identify nodule candidates. These candidates represent both nodules and normal pulmonary structures. For each candidate, two- and three-dimensional geometric and gray-level features are computed. These features are merged with linear discriminant analysis to reduce the number of candidates that correspond to normal structures. This method was applied to a 17-case database. Receiver operating characteristic (ROC) analysis was used to evaluate the automated classifier. Results yielded an area under the ROC curve of 0.93 in the task of classifying candidates detected during thresholding as nodules or nonnodules.