Sigmoni: classification of nanopore signal with a compressed pangenome index
Vikram S Shivakumar(Johns Hopkins University), Ben Langmead(Johns Hopkins University), Mohsen Zakeri(Johns Hopkins University), Omar Ahmed(Johns Hopkins University), Sam Kovaka(Johns Hopkins University)
Cited by 26
Related Papers
Improved metagenomic analysis with Kraken 2
|Genome biology|2019|6.9k
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
|Genome biology|2019|2.1k
Targeted nanopore sequencing by real-time mapping of raw electrical signal with UNCALLED
|Nature Biotechnology|2020|293
Improved metagenomic analysis with Kraken 2
|bioRxiv (Cold Spring Harbor Laboratory)|2019|237
Transcriptome assembly from long-read RNA-seq alignments with StringTie2
|bioRxiv (Cold Spring Harbor Laboratory)|2019|109