Limited oxygen in standard cell culture alters metabolism and function of differentiated cells

Joycelyn Tan(University of Cambridge), Sam Virtue(University of Cambridge), Dougall M. Norris(University of Cambridge), Olivia J. Conway(University of Cambridge), Ming Yang(University of Cambridge), Guillaume Bidault(University of Cambridge), Christopher Gribben(Wellcome/MRC Cambridge Stem Cell Institute), Fatima Lugtu(Wellcome/MRC Cambridge Stem Cell Institute), Ioannis Kamzolas(European Bioinformatics Institute), James R. Krycer(Queensland University of Technology), Richard J. Mills(Queensland University of Technology), Liang Lu(University of Cambridge), Conceição Pereira(University of Cambridge), Martin Dale(University of Cambridge), Amber S. Shun-Shion(University of Cambridge), Harry J. M. Baird(University of Cambridge), James A. Horscroft(University of Cambridge), Alice P. Sowton(University of Cambridge), Marcella Ma(University of Cambridge), Stefania Carobbio(University of Cambridge), Evangelia Petsalaki(European Bioinformatics Institute), Andrew J. Murray(University of Cambridge), David C. Gershlick(University of Cambridge), James A. Nathan(University of Cambridge), James E. Hudson(Queensland University of Technology), Ludovic Vallier(Wellcome/MRC Cambridge Stem Cell Institute), Kelsey H. Fisher‐Wellman(University of North Carolina at Chapel Hill), Christian Frezza(University of Cambridge), Antonio Vidal‐Puig(University of Cambridge), Daniel J. Fazakerley(University of Cambridge)
The EMBO Journal
April 5, 2024
Cited by 54Open Access
Full Text

Abstract

The in vitro oxygen microenvironment profoundly affects the capacity of cell cultures to model physiological and pathophysiological states. Cell culture is often considered to be hyperoxic, but pericellular oxygen levels, which are affected by oxygen diffusivity and consumption, are rarely reported. Here, we provide evidence that several cell types in culture actually experience local hypoxia, with important implications for cell metabolism and function. We focused initially on adipocytes, as adipose tissue hypoxia is frequently observed in obesity and precedes diminished adipocyte function. Under standard conditions, cultured adipocytes are highly glycolytic and exhibit a transcriptional profile indicative of physiological hypoxia. Increasing pericellular oxygen diverted glucose flux toward mitochondria, lowered HIF1α activity, and resulted in widespread transcriptional rewiring. Functionally, adipocytes increased adipokine secretion and sensitivity to insulin and lipolytic stimuli, recapitulating a healthier adipocyte model. The functional benefits of increasing pericellular oxygen were also observed in macrophages, hPSC-derived hepatocytes and cardiac organoids. Our findings demonstrate that oxygen is limiting in many terminally-differentiated cell types, and that considering pericellular oxygen improves the quality, reproducibility and translatability of culture models.


Related Papers