Epigenetic plasticity cooperates with cell-cell interactions to direct pancreatic tumorigenesis

Cassandra Burdziak(Memorial Sloan Kettering Cancer Center), Direna Alonso‐Curbelo(Memorial Sloan Kettering Cancer Center), Thomas Walle(Memorial Sloan Kettering Cancer Center), José Reyes(Memorial Sloan Kettering Cancer Center), Francisco M. Barriga(Memorial Sloan Kettering Cancer Center), Doron Haviv(Memorial Sloan Kettering Cancer Center), Yubin Xie(Memorial Sloan Kettering Cancer Center), Zhen Zhao(Memorial Sloan Kettering Cancer Center), Chujun Zhao(Memorial Sloan Kettering Cancer Center), Hsuan-An Chen(Memorial Sloan Kettering Cancer Center), Ojasvi Chaudhary(Memorial Sloan Kettering Cancer Center), Ignas Masilionis(Memorial Sloan Kettering Cancer Center), Zi-Ning Choo(Memorial Sloan Kettering Cancer Center), Vianne R. Gao(Memorial Sloan Kettering Cancer Center), Wei Luan(Memorial Sloan Kettering Cancer Center), Alexandra Wuest(Memorial Sloan Kettering Cancer Center), Yu-Jui Ho(Memorial Sloan Kettering Cancer Center), Yuhong Wei(McGill University), Daniela F. Quail(McGill University), Richard P. Koche(Memorial Sloan Kettering Cancer Center), Linas Mažutis(Memorial Sloan Kettering Cancer Center), Ronan Chaligné(Memorial Sloan Kettering Cancer Center), Tal Nawy(Memorial Sloan Kettering Cancer Center), Scott W. Lowe(Memorial Sloan Kettering Cancer Center), Dana Pe’er(Memorial Sloan Kettering Cancer Center)
Science
May 11, 2023
Cited by 203Open Access
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Abstract

The response to tumor-initiating inflammatory and genetic insults can vary among morphologically indistinguishable cells, suggesting as yet uncharacterized roles for epigenetic plasticity during early neoplasia. To investigate the origins and impact of such plasticity, we performed single-cell analyses on normal, inflamed, premalignant, and malignant tissues in autochthonous models of pancreatic cancer. We reproducibly identified heterogeneous cell states that are primed for diverse, late-emerging neoplastic fates and linked these to chromatin remodeling at cell-cell communication loci. Using an inference approach, we revealed signaling gene modules and tissue-level cross-talk, including a neoplasia-driving feedback loop between discrete epithelial and immune cell populations that was functionally validated in mice. Our results uncover a neoplasia-specific tissue-remodeling program that may be exploited for pancreatic cancer interception.


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