<i>In vivo</i> metabolomics identifies CD38 as an emergent vulnerability in <i>LKB1</i> -mutant lung cancer

Jiehui Deng(NYU Langone Health), David H. Peng(NYU Langone Health), David Fenyö(Institute for Systems Biology), Hao Yuan(Office of Science), Alfonso Lopez(NYU Langone Health), Daniel Levin(NYU Langone Health), Mary Meynardie(NYU Langone Health), Mari Quinteros(NYU Langone Health), Michela Ranieri(NYU Langone Health), Soumyadip Sahu(NYU Langone Health), Sally C. M. Lau(NYU Langone Health), Elaine Shum(NYU Langone Health), Vamsidhar Velcheti(NYU Langone Health), Salman R. Punekar(NYU Langone Health), Natasha Rekhtman(Memorial Sloan Kettering Cancer Center), Catríona M. Dowling(University of Limerick), Vajira Weeresekara(Harvard University), Yun Xue(Chinese Academy of Sciences), Hongbin Ji(Chinese Academy of Sciences), Yik Siu(New York University), Drew R. Jones(New York University), Aaron N. Hata(Harvard University), Takeshi Shimamura(University of Illinois Chicago), John T. Poirier(New York University), Charles M. Rudin(Memorial Sloan Kettering Cancer Center), Takamitsu Hattori(New York University), Shohei Koide(New York University), Thales Papagiannakopoulos(New York University), Benjamin G. Neel(New York University), Nabeel Bardeesy(Harvard University), Kwok‐Kin Wong(NYU Langone Health)
bioRxiv (Cold Spring Harbor Laboratory)
April 20, 2023
Cited by 1Open Access
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Abstract

ABSTRACT LKB1/STK11 is a serine/threonine kinase that plays a major role in controlling cell metabolism, resulting in potential therapeutic vulnerabilities in LKB1-mutant cancers. Here, we identify the NAD + degrading ectoenzyme, CD38, as a new target in LKB1-mutant NSCLC. Metabolic profiling of genetically engineered mouse models (GEMMs) revealed that LKB1 mutant lung cancers have a striking increase in ADP-ribose, a breakdown product of the critical redox co-factor, NAD + . Surprisingly, compared with other genetic subsets, murine and human LKB1-mutant NSCLC show marked overexpression of the NAD+-catabolizing ectoenzyme, CD38 on the surface of tumor cells. Loss of LKB1 or inactivation of Salt-Inducible Kinases (SIKs)—key downstream effectors of LKB1— induces CD38 transcription induction via a CREB binding site in the CD38 promoter. Treatment with the FDA-approved anti-CD38 antibody, daratumumab, inhibited growth of LKB1-mutant NSCLC xenografts. Together, these results reveal CD38 as a promising therapeutic target in patients with LKB1 mutant lung cancer. SIGNIFICANCE Loss-of-function mutations in the LKB1 tumor suppressor of lung adenocarcinoma patients and are associated with resistance to current treatments. Our study identified CD38 as a potential therapeutic target that is highly overexpressed in this specific subtype of cancer, associated with a shift in NAD homeostasis.


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