The International Mouse Phenotyping Consortium: comprehensive knockout phenotyping underpinning the study of human disease

Tudor Groza(European Bioinformatics Institute), Federico López(European Bioinformatics Institute), Hamed Mashhadi(European Bioinformatics Institute), Violeta Muñoz‐Fuentes(European Bioinformatics Institute), Osman Güneş(European Bioinformatics Institute), Robert Wilson(European Bioinformatics Institute), Pilar Cacheiro(Queen Mary University of London), Anthony Frost(Mary Lyon Centre at MRC Harwell), Piia Keskivali-Bond(Mary Lyon Centre at MRC Harwell), Bora Vardal(Mary Lyon Centre at MRC Harwell), Aaron McCoy(Mary Lyon Centre at MRC Harwell), Tsz Kwan Cheng(Mary Lyon Centre at MRC Harwell), Luís Santos(Turing Institute), Sara Wells(Mary Lyon Centre at MRC Harwell), Damian Smedley(Queen Mary University of London), Ann‐Marie Mallon(Turing Institute), Helen Parkinson(European Bioinformatics Institute)
Nucleic Acids Research
October 28, 2022
Cited by 445Open Access
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Abstract

The International Mouse Phenotyping Consortium (IMPC; https://www.mousephenotype.org/) web portal makes available curated, integrated and analysed knockout mouse phenotyping data generated by the IMPC project consisting of 85M data points and over 95,000 statistically significant phenotype hits mapped to human diseases. The IMPC portal delivers a substantial reference dataset that supports the enrichment of various domain-specific projects and databases, as well as the wider research and clinical community, where the IMPC genotype-phenotype knowledge contributes to the molecular diagnosis of patients affected by rare disorders. Data from 9,000 mouse lines and 750 000 images provides vital resources enabling the interpretation of the ignorome, and advancing our knowledge on mammalian gene function and the mechanisms underlying phenotypes associated with human diseases. The resource is widely integrated and the lines have been used in over 4,600 publications indicating the value of the data and the materials.


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