Cryptic transmission of SARS-CoV-2 in Washington state

Trevor Bedford(University of Washington), Alexander L. Greninger(University of Washington), Pavitra Roychoudhury(University of Washington), Lea M. Starita(University of Washington), Michael Famulare(Bellevue Hospital Center), Meei‐Li Huang(University of Washington), Arun Kumar Nalla(University of Washington), Gregory Pepper(University of Washington), Adam Reinhardt(University of Washington), Hong Xie(University of Washington), Lasata Shrestha(University of Washington), Truong N. Nguyen(University of Washington), Amanda Adler(Seattle Children's Hospital), Elisabeth Brandstetter(University of Washington), Shari Cho(University of Washington), Danielle Giroux(University of Washington), Peter D. Han(University of Washington), Kairsten Fay(Fred Hutch Cancer Center), Chris Frazar(University of Washington), Misja Ilcisin(Fred Hutch Cancer Center), Kirsten Lacombe(Fred Hutch Cancer Center), Jover Lee(University of Washington), Anahita Kiavand(University of Washington), M Richardson(University of Washington), Thomas R. Sibley(University of Washington), Melissa Truong(University of Washington), Caitlin R. Wolf(University of Washington), Deborah A. Nickerson(University of Washington), Mark J. Rieder(University of Washington), Janet A. Englund(University of Washington), The Seattle Flu Study Investigators(SIB Swiss Institute of Bioinformatics), James Hadfield(University of Washington), Emma B. Hodcroft(SIB Swiss Institute of Bioinformatics), John Huddleston(University of Washington), Louise H. Moncla(SIB Swiss Institute of Bioinformatics), Nicola F. Müller(University of California, San Francisco), Richard A. Neher(SIB Swiss Institute of Bioinformatics), Xianding Deng(University of California, San Francisco), Wei Gu(University of California, San Francisco), Scot Federman(Public Health – Seattle & King County), Charles Y. Chiu(Washington State Department of Health), Jeffrey S. Duchin(Washington State Department of Health), Romesh Gautom(Washington State Department of Health), Geoff Melly(Washington State Department of Health), Brian Hiatt(Washington State Department of Health), Philip Dykema(Washington State Department of Health), Scott Lindquist(Washington State Department of Health), Krista Queen(Centers for Disease Control and Prevention), Ying Tao(Centers for Disease Control and Prevention), Anna Uehara(Centers for Disease Control and Prevention), Suxiang Tong(Centers for Disease Control and Prevention), Duncan MacCannell(University of Washington), Gregory L. Armstrong(University of Washington), Geoffrey S. Baird(Howard Hughes Medical Institute), Helen Y. Chu(University of Washington), Jay Shendure(Howard Hughes Medical Institute), Keith R. Jerome(University of Washington), Helen Y. Chu(University of Washington), Michael Boeckh(Bellevue Hospital Center), Janet A. Englund(University of Washington), Michael Famulare(University of Washington), Barry R. Lutz(University of Washington), Deborah A. Nickerson(University of Washington), Mark J. Rieder(University of Washington), Lea M. Starita(Howard Hughes Medical Institute), Matthew Thompson(University of Washington), Jay Shendure(Howard Hughes Medical Institute), Trevor Bedford(University of Washington), Amanda Adler(University of Washington), Elisabeth Brandstetter(University of Washington), Shari Cho(University of Washington), Chris Frazar(University of Washington), Danielle Giroux(University of Washington), Peter D. Han(University of Washington), James Hadfield(Fred Hutch Cancer Center), Shichu Huang(University of Washington), Michael L. Jackson, Anahita Kiavand(University of Washington), Louise E. Kimball, Kirsten Lacombe(Seattle Children's Hospital), Jennifer Logue, Victoria Lyon(University of Washington), Kira L. Newman(Fred Hutch Cancer Center), M Richardson(University of Washington), Thomas R. Sibley(University of Washington), Monica Zigman Suchsland(University of Washington), Melissa Truong(University of Washington), Caitlin R. Wolf(University of Washington)
Science
September 10, 2020
Cited by 323Open Access
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Abstract

A series of unfortunate events The history of how severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) spread around the planet has been far from clear. Several narratives have been propagated by social media and, in some cases, national policies were forged in response. Now that many thousands of virus sequences are available, two studies analyzed some of the key early events in the spread of SARS-CoV-2. Bedford et al. found that the virus arrived in Washington state in late January or early February. The viral genome from the first case detected had mutations similar to those found in Chinese samples and rapidly spread and dominated subsequent undetected community transmission. The other viruses detected had origins in Europe. Worobey et al. found that early introductions into Germany and the west coast of the United States were extinguished by vigorous public health efforts, but these successes were largely unrecognized. Unfortunately, several major travel events occurred in February, including repatriations from China, with lax public health follow-up. Serial, independent introductions triggered the major outbreaks in the United States and Europe that still hold us in the grip of control measures. Science , this issue p. 571 , p. 564


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