QSAR without borders

Eugene Muratov(University of North Carolina at Chapel Hill), Jürgen Bajorath(University of Bonn), Robert P. Sheridan(Merck & Co., Inc., Rahway, NJ, USA (United States)), Igor V. Tetko(Helmholtz Zentrum München), Dmitry Filimonov(Institute of Biomedical Chemistry), Vladimir Poroikov(Institute of Biomedical Chemistry), Tudor I. Oprea(University of New Mexico), Igor I. Baskin(Lomonosov Moscow State University), Alexandre Varnek(Université de Strasbourg), Adrián E. Roitberg(University of Florida), Olexandr Isayev(University of North Carolina at Chapel Hill), Stefano Curtalolo(Duke University), Denis Fourches(North Carolina State University), Yoram Cohen(University of California, Los Angeles), Alán Aspuru‐Guzik(Toronto Public Health), David A. Winkler(University of Nottingham), Dimitris K. Agrafiotis(Novartis (Switzerland)), Artem Cherkasov(University of British Columbia), Alexander Tropsha(University of North Carolina at Chapel Hill)
Chemical Society Reviews
January 1, 2020
Cited by 837Open Access
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Abstract

Prediction of chemical bioactivity and physical properties has been one of the most important applications of statistical and more recently, machine learning and artificial intelligence methods in chemical sciences. This field of research, broadly known as quantitative structure-activity relationships (QSAR) modeling, has developed many important algorithms and has found a broad range of applications in physical organic and medicinal chemistry in the past 55+ years. This Perspective summarizes recent technological advances in QSAR modeling but it also highlights the applicability of algorithms, modeling methods, and validation practices developed in QSAR to a wide range of research areas outside of traditional QSAR boundaries including synthesis planning, nanotechnology, materials science, biomaterials, and clinical informatics. As modern research methods generate rapidly increasing amounts of data, the knowledge of robust data-driven modelling methods professed within the QSAR field can become essential for scientists working both within and outside of chemical research. We hope that this contribution highlighting the generalizable components of QSAR modeling will serve to address this challenge.


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