Using deep convolutional neural networks for multi-classification of thyroid tumor by histopathology: a large-scale pilot study

Yunjun Wang(Shanghai Medical College of Fudan University), Qing Guan(Shanghai Medical College of Fudan University), I Weng Lao(Fudan University Shanghai Cancer Center), Li Wang(Shanghai Jiao Tong University), Yi‐Long Wu(Shanghai Medical College of Fudan University), Duanshu Li(Shanghai Medical College of Fudan University), Qinghai Ji(Shanghai Medical College of Fudan University), Yu Wang(Shanghai Medical College of Fudan University), Yongxue Zhu(Shanghai Medical College of Fudan University), Hongtao Lu(Shanghai Jiao Tong University), Jun Xiang(Shanghai Medical College of Fudan University)
Annals of Translational Medicine
September 1, 2019
Cited by 92Open Access
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Abstract

BACKGROUND: To explore whether deep convolutional neural networks (DCNNs) have the potential to improve diagnostic efficiency and increase the level of interobserver agreement in the classification of thyroid nodules in histopathological slides. METHODS: A total of 11,715 fragmented images from 806 patients' original histological images were divided into a training dataset and a test dataset. Inception-ResNet-v2 and VGG-19 were trained using the training dataset and tested using the test dataset to determine the diagnostic efficiencies of different histologic types of thyroid nodules, including normal tissue, adenoma, nodular goiter, papillary thyroid carcinoma (PTC), follicular thyroid carcinoma (FTC), medullary thyroid carcinoma (MTC) and anaplastic thyroid carcinoma (ATC). Misdiagnoses were further analyzed. RESULTS: 94.42%, respectively). The VGG-19 model applied to 7 pathology types showed a fragmentation accuracy of 88.33% for normal tissue, 98.57% for ATC, 98.89% for FTC, 100% for MTC, 97.77% for PTC, 100% for nodular goiter and 92.44% for adenoma. It achieved excellent diagnostic efficiencies for all the malignant types. Normal tissue and adenoma were the most challenging histological types to classify. CONCLUSIONS: The DCNN models, especially VGG-19, achieved satisfactory accuracies on the task of differentiating thyroid tumors by histopathology. Analysis of the misdiagnosed cases revealed that normal tissue and adenoma were the most challenging histological types for the DCNN to differentiate, while all the malignant classifications achieved excellent diagnostic efficiencies. The results indicate that DCNN models may have potential for facilitating histopathologic thyroid disease diagnosis.


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