Genetic basis of ruminant headgear and rapid antler regeneration

Yu Wang(Northwest A&F University), Chenzhou Zhang(Northwestern Polytechnical University), Nini Wang(Northwest A&F University), Zhipeng Li(Chinese Academy of Agricultural Sciences), Rasmus Heller(University of Copenhagen), Rong Liu(Kunming Institute of Zoology), Yue Zhao(Northwest A&F University), Jiangang Han(Chinese Academy of Agricultural Sciences), Xiangyu Pan(Northwest A&F University), Zhuqing Zheng(Northwest A&F University), Xueqin Dai(Kunming Institute of Zoology), Ceshi Chen(Kunming Institute of Zoology), Mingle Dou(Northwest A&F University), Shujun Peng(Northwest A&F University), Xianqing Chen(Northwestern Polytechnical University), Jing Liu(Northwest A&F University), Ming Li(Northwest A&F University), Kun Wang(Northwestern Polytechnical University), Chang Liu(Northwestern Polytechnical University), Zeshan Lin(Northwestern Polytechnical University), Lei Chen(Northwestern Polytechnical University), Fei Hao(Northwestern Polytechnical University), Wenbo Zhu(Northwestern Polytechnical University), Chengchuang Song(Northwest A&F University), Chen Zhao(Northwest A&F University), Chengli Zheng(Sichuan Academy of Agricultural Sciences), Jianming Wang(Sichuan Academy of Agricultural Sciences), Shengwei Hu(Shihezi University), Cunyuan Li(Shihezi University), Hui Yang(Northwestern Polytechnical University), Lin Jiang(Chinese Academy of Agricultural Sciences), Guangyu Li(Chinese Academy of Agricultural Sciences), Mingjun Liu(Xinjiang Academy of Animal Science), Tad S. Sonstegard(Recombinetics (United States)), Guojie Zhang(University of Copenhagen), Yu Jiang(Northwest A&F University), Wen Wang(Northwestern Polytechnical University), Qiang Qiu(Northwestern Polytechnical University)
Science
June 20, 2019
Cited by 193Open Access
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Abstract

Phylogeny and characteristics of ruminants Ruminants are a diverse group of mammals that includes families containing well-known taxa such as deer, cows, and goats. However, their evolutionary relationships have been contentious, as have the origins of their distinctive digestive systems and headgear, including antlers and horns (see the Perspective by Ker and Yang). To understand the relationships among ruminants, L. Chen et al. sequenced 44 species representing 6 families and performed a phylogenetic analysis. From this analysis, they were able to resolve the phylogeny of many genera and document incomplete lineage sorting among major clades. Interestingly, they found evidence for large population reductions among many taxa starting at approximately 100,000 years ago, coinciding with the migration of humans out of Africa. Examining the bony appendages on the head—the so-called headgear—Wang et al. describe specific evolutionary changes in the ruminants and identify selection on cancer-related genes that may function in antler development in deer. Finally, Lin et al. take a close look at the reindeer genome and identify the genetic basis of adaptations that allow reindeer to survive in the harsh conditions of the Arctic. Science , this issue p. eaav6202 , p. eaav6335 , p. eaav6312 ; see also p. 1130


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