Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure

Olivier Commowick(Centre National de la Recherche Scientifique), Audrey Istace(Hospices Civils de Lyon), Michaël Kain(Centre National de la Recherche Scientifique), Baptiste Laurent(Inserm), Florent Leray(Centre National de la Recherche Scientifique), Mathieu Simon(Centre National de la Recherche Scientifique), Sorina Camarasu-Pop(Université Claude Bernard Lyon 1), Pascal Girard(Université Claude Bernard Lyon 1), Roxana Améli(Hospices Civils de Lyon), Jean‐Christophe Ferré(Centre National de la Recherche Scientifique), Anne Kerbrat(Centre National de la Recherche Scientifique), Thomas Tourdias(Centre Hospitalier Universitaire de Bordeaux), Frédéric Cervenansky(Université Claude Bernard Lyon 1), Tristan Glatard(Concordia University), Jérémy Beaumont(Centre National de la Recherche Scientifique), Senan Doyle, Florence Forbes(Centre Inria de l'Université Grenoble Alpes), Jesse Knight(University of Guelph), April Khademi(Toronto Metropolitan University), Amirreza Mahbod(KTH Royal Institute of Technology), Chunliang Wang(KTH Royal Institute of Technology), Richard McKinley(University of Bern), Franca Wagner(University of Bern), John Muschelli(Johns Hopkins University), Elizabeth Sweeney(Johns Hopkins University), Eloy Roura(Universitat de Girona), Xavier Lladó(Universitat de Girona), Michel M. Santos(Universidade Federal de Pernambuco), Wellington Pinheiro dos Santos(Universidade Federal de Pernambuco), Abel G. Silva-Filho(Universidade Federal de Pernambuco), Xavier Tomas-Fernandez(Boston Children's Hospital), Hélène Urien(Télécom Paris), Isabelle Bloch(Télécom Paris), Sergi Valverde(Universitat de Girona), Mariano Cabezas(Universitat de Girona), Francisco Javier Vera-Olmos(Universidad Rey Juan Carlos), Norberto Malpica(Universidad Rey Juan Carlos), Charles R.G. Guttmann(Brigham and Women's Hospital), Sandra Vukusic(Hospices Civils de Lyon), Gilles Edan(Centre National de la Recherche Scientifique), Michel Dojat(Inserm), Martin Styner(University of North Carolina at Chapel Hill), Simon K. Warfield(Boston Children's Hospital), François Cotton(Hospices Civils de Lyon), Christian Barillot(Centre National de la Recherche Scientifique)
Scientific Reports
September 6, 2018
Cited by 280Open Access
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Abstract

We present a study of multiple sclerosis segmentation algorithms conducted at the international MICCAI 2016 challenge. This challenge was operated using a new open-science computing infrastructure. This allowed for the automatic and independent evaluation of a large range of algorithms in a fair and completely automatic manner. This computing infrastructure was used to evaluate thirteen methods of MS lesions segmentation, exploring a broad range of state-of-theart algorithms, against a high-quality database of 53 MS cases coming from four centers following a common definition of the acquisition protocol. Each case was annotated manually by an unprecedented number of seven different experts. Results of the challenge highlighted that automatic algorithms, including the recent machine learning methods (random forests, deep learning, …), are still trailing human expertise on both detection and delineation criteria. In addition, we demonstrate that computing a statistically robust consensus of the algorithms performs closer to human expertise on one score (segmentation) although still trailing on detection scores.


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