Pandemic Potential of a Strain of Influenza A (H1N1): Early Findings

Christophe Fraser(Imperial College London), Christl A. Donnelly(Imperial College London), Simon Cauchemez(Imperial College London), William P. Hanage(Imperial College London), Maria D. Van Kerkhove(Imperial College London), T. Déirdre Hollingsworth(Imperial College London), Jamie T. Griffin(Imperial College London), Rebecca F. Baggaley(Imperial College London), Helen E. Jenkins(Imperial College London), Emily Lyons(Imperial College London), Thibaut Jombart(Imperial College London), Wes Hinsley(Imperial College London), Nicholas C. Grassly(Imperial College London), François Balloux(Imperial College London), Azra C. Ghani(Imperial College London), Neil M. Ferguson(Imperial College London), Andrew Rambaut(University of Edinburgh), Oliver G. Pybus(University of Oxford), Hugo López‐Gatell(Bank of Mexico), Celia Alpuche‐Aranda(National College), Ietza Bojórquez(Bank of Mexico), Ethel Palacios Zavala(Bank of Mexico), Dulce Ma. Espejo Guevara(Secretaria de Salud), Francesco Checchi(World Health Organization - Pakistan), Erika Garcia(World Health Organization - Pakistan), Stéphane Hugonnet(World Health Organization - Pakistan), Cathy Roth(World Health Organization - Pakistan)
Science
May 11, 2009
Cited by 1,960Open Access
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Abstract

A novel influenza A (H1N1) virus has spread rapidly across the globe. Judging its pandemic potential is difficult with limited data, but nevertheless essential to inform appropriate health responses. By analyzing the outbreak in Mexico, early data on international spread, and viral genetic diversity, we make an early assessment of transmissibility and severity. Our estimates suggest that 23,000 (range 6000 to 32,000) individuals had been infected in Mexico by late April, giving an estimated case fatality ratio (CFR) of 0.4% (range: 0.3 to 1.8%) based on confirmed and suspected deaths reported to that time. In a community outbreak in the small community of La Gloria, Veracruz, no deaths were attributed to infection, giving an upper 95% bound on CFR of 0.6%. Thus, although substantial uncertainty remains, clinical severity appears less than that seen in the 1918 influenza pandemic but comparable with that seen in the 1957 pandemic. Clinical attack rates in children in La Gloria were twice that in adults (<15 years of age: 61%; >/=15 years: 29%). Three different epidemiological analyses gave basic reproduction number (R0) estimates in the range of 1.4 to 1.6, whereas a genetic analysis gave a central estimate of 1.2. This range of values is consistent with 14 to 73 generations of human-to-human transmission having occurred in Mexico to late April. Transmissibility is therefore substantially higher than that of seasonal flu, and comparable with lower estimates of R0 obtained from previous influenza pandemics.


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