IMG/M: a data management and analysis system for metagenomes

Victor Markowitz(Lawrence Berkeley National Laboratory), Natalia Ivanova(Lawrence Berkeley National Laboratory), Ernest Szeto(Joint Genome Institute), Krishna Palaniappan(Joint Genome Institute), Kung‐Hui Chu(Lawrence Berkeley National Laboratory), Daniel Dalevi(Lawrence Berkeley National Laboratory), I-M. A. Chen(Lawrence Berkeley National Laboratory), Yuri Grechkin(Lawrence Berkeley National Laboratory), Inna Dubchak(Lawrence Berkeley National Laboratory), Iain Anderson(Lawrence Berkeley National Laboratory), A. Lykidis(Joint Genome Institute), Konstantinos Mavromatis(Joint Genome Institute), Philip Hugenholtz(Joint Genome Institute), Nikos C. Kyrpides(Lawrence Berkeley National Laboratory)
Nucleic Acids Research
October 11, 2007
10.1093/nar/gkm869
Cited by 385Open Access
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Abstract

IMG/M is a data management and analysis system for microbial community genomes (metagenomes) hosted at the Department of Energy's (DOE) Joint Genome Institute (JGI). IMG/M consists of metagenome data integrated with isolate microbial genomes from the Integrated Microbial Genomes (IMG) system. IMG/M provides IMG's comparative data analysis tools extended to handle metagenome data, together with metagenome-specific analysis tools. IMG/M is available at http://img.jgi.doe.gov/m.

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