Extension of the Visualization Tool MapMan to Allow Statistical Analysis of Arrays, Display of Coresponding Genes, and Comparison with Known Responses
Björn Usadel(Max Planck Institute of Molecular Plant Physiology), Axel Nagel(Max Planck Institute of Molecular Plant Physiology), Oliver Thimm(Max Planck Institute of Molecular Plant Physiology), Henning Redestig(Max Planck Institute of Molecular Plant Physiology), Oliver E. Blaesing(Max Planck Institute of Molecular Plant Physiology), Natalia Palacios‐Rojas(Max Planck Institute of Molecular Plant Physiology), Joachim Selbig(Max Planck Institute of Molecular Plant Physiology), Jan Hannemann(Max Planck Institute of Molecular Plant Physiology), Maria Piques(Max Planck Institute of Molecular Plant Physiology), Dirk Steinhauser(Max Planck Institute of Molecular Plant Physiology), Wolf‐Rüdiger Scheible(Max Planck Institute of Molecular Plant Physiology), Yves Gibon(Max Planck Institute of Molecular Plant Physiology), Rosa Morcuende(Max Planck Institute of Molecular Plant Physiology), Daniel Weicht(Max Planck Institute of Molecular Plant Physiology), Svenja Meyer(Max Planck Institute of Molecular Plant Physiology), Mark Stitt(Max Planck Institute of Molecular Plant Physiology)
Cited by 633Open Access
Abstract
MapMan is a user-driven tool that displays large genomics datasets onto diagrams of metabolic pathways or other processes. Here, we present new developments, including improvements of the gene assignments and the user interface, a strategy to visualize multilayered datasets, the incorporation of statistics packages, and extensions of the software to incorporate more biological information including visualization of corresponding genes and horizontal searches for similar global responses across large numbers of arrays.
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