ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data
Martin Morgan(European Bioinformatics Institute), Simon Anders(European Bioinformatics Institute), Michael Lawrence(European Bioinformatics Institute), Patrick Aboyoun(European Bioinformatics Institute), Hervé Pagès(European Bioinformatics Institute), Robert Gentleman(European Bioinformatics Institute)
Cited by 584Open Access
Abstract
UNLABELLED: ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources. AVAILABILITY AND IMPLEMENTATION: This package is implemented in R and available at the Bioconductor web site; the package contains a 'vignette' outlining typical work flows.
Related Papers
No related papers found
Powered by citation graph analysis