Klebsormidium flaccidum genome reveals primary factors for plant terrestrial adaptation

Koichi Hori(Tokyo Institute of Technology), Fumito Maruyama(Tokyo Medical and Dental University), Takatomo Fujisawa(National Institute of Genetics), Tomoaki Togashi(Tokyo Institute of Technology), Nozomi Yamamoto(Tokyo Institute of Technology), Mitsunori Seo(RIKEN Center for Sustainable Resource Science), Shusei Sato(Tohoku University), Takuji Yamada(Tokyo Institute of Technology), Hiroshi Mori(Tokyo Institute of Technology), Naoyuki Tajima(The University of Tokyo), Takashi Moriyama(The University of Tokyo), Masahiko Ikeuchi(The University of Tokyo), Mai Watanabe(The University of Tokyo), Hajime Wada(Japan Science and Technology Agency), Koichi Kobayashi(The University of Tokyo), Masakazu Saito(Japan Science and Technology Agency), Tatsuru Masuda(The University of Tokyo), Yuko Sasaki‐Sekimoto(Tokyo Institute of Technology), Kiyoshi Mashiguchi(RIKEN Center for Sustainable Resource Science), Koichiro Awai(Shizuoka University), Mie Shimojima(Tokyo Institute of Technology), Shinji Masuda(Tokyo Institute of Technology), Masako Iwai(Tokyo Institute of Technology), Takashi Nobusawa(Japan Agency for Marine-Earth Science and Technology), Takafumi Narise(Tokyo Institute of Technology), Satoshi Kondo(Tokyo Institute of Technology), Hikaru Saito(Tokyo Institute of Technology), Ryoichi Sato(Tokyo Institute of Technology), Masato Murakawa(Tokyo Institute of Technology), Yuta Ihara(Tokyo Institute of Technology), Yui Oshima-Yamada(Tokyo Institute of Technology), Kinuka Ohtaka(Tokyo Institute of Technology), Masanori Satoh(Tokyo Institute of Technology), Kohei Sonobe(Tokyo Institute of Technology), Midori Ishii(Tokyo Institute of Technology), Ryosuke Ohtani(Tokyo Institute of Technology), Miyu Kanamori-Sato(Tokyo Institute of Technology), Rina Honoki(Tokyo Institute of Technology), Daichi Miyazaki(Tokyo Institute of Technology), Hitoshi Mochizuki(Tokyo Institute of Technology), Jumpei Umetsu(Tokyo Institute of Technology), Koichi Higashi(Tokyo Institute of Technology), Daisuke Shibata(Kazusa DNA Research Institute), Yuji Kamiya(RIKEN Center for Sustainable Resource Science), Naoki Sato(Japan Science and Technology Agency), Yasukazu Nakamura(National Institute of Genetics), Satoshi Tabata(Kazusa DNA Research Institute), Shigeru Ida(Tokyo Institute of Technology), Ken Kurokawa(Tokyo Institute of Technology), Hiroyuki Ohta(Tokyo Institute of Technology)
Nature Communications
May 28, 2014
Cited by 618Open Access
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Abstract

The colonization of land by plants was a key event in the evolution of life. Here we report the draft genome sequence of the filamentous terrestrial alga Klebsormidium flaccidum (Division Charophyta, Order Klebsormidiales) to elucidate the early transition step from aquatic algae to land plants. Comparison of the genome sequence with that of other algae and land plants demonstrate that K. flaccidum acquired many genes specific to land plants. We demonstrate that K. flaccidum indeed produces several plant hormones and homologues of some of the signalling intermediates required for hormone actions in higher plants. The K. flaccidum genome also encodes a primitive system to protect against the harmful effects of high-intensity light. The presence of these plant-related systems in K. flaccidum suggests that, during evolution, this alga acquired the fundamental machinery required for adaptation to terrestrial environments. Plant colonization of land is an important evolutionary event. Here, the authors sequence the genome of a filamentous terrestrial alga and, through a comparative analysis with related algae and land plant species, provide insight into how aquatic algae adapted to terrestrial environments.


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