The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

Charles Wang; Binsheng Gong; Pierre R. Bushel; Jean Thierry‐Mieg; Danielle Thierry‐Mieg; Joshua Xu; Hong Fang; Huixiao Hong; Jie Shen; Zhenqiang Su; Joe Meehan; Xiaojin Li; Lu Yang; Haiqing Li; Paweł P. Łabaj; David P. Kreil; Dalila B. Megherbi; Stan Gaj; Florian Caiment; Joost van Delft; Jos Kleinjans; Andreas Scherer; Viswanath Devanarayan; Jian Wang; Yong Yang; Hui-Rong Qian; Lee Lancashire; Marina Bessarabova; Yuri Nikolsky; Cesare Furlanello; Marco Chierici; Davide Albanese; Giuseppe Jurman; Samantha Riccadonna; Michele Filosi; Roberto Visintainer; Ke Zhang; Jianying Li; Jui‐Hua Hsieh; Daniel Svoboda; James C. Fuscoe; Youping Deng; Leming Shi; Richard S. Paules; Scott S. Auerbach; Weida Tong

doi:10.1038/nbt.3001

The concordance between RNA-seq and microarray data depends on chemical treatment and transcript abundance

Charles Wang(Loma Linda University), Binsheng Gong(National Center for Toxicological Research), Pierre R. Bushel(National Institute of Environmental Health Sciences), Jean Thierry‐Mieg(National Institutes of Health), Danielle Thierry‐Mieg(National Institutes of Health), Joshua Xu(National Center for Toxicological Research), Hong Fang(National Center for Toxicological Research), Huixiao Hong(National Center for Toxicological Research), Jie Shen(National Center for Toxicological Research), Zhenqiang Su(National Center for Toxicological Research), Joe Meehan(National Center for Toxicological Research), Xiaojin Li(City Of Hope National Medical Center), Lu Yang(City Of Hope National Medical Center), Haiqing Li(City Of Hope National Medical Center), Paweł P. Łabaj, David P. Kreil(University of Warwick), Dalila B. Megherbi(University of Massachusetts Lowell), Stan Gaj(Maastricht University), Florian Caiment(Maastricht University), Joost van Delft(Maastricht University), Jos Kleinjans(Maastricht University), Andreas Scherer(Walter and Eliza Hall Institute of Medical Research), Viswanath Devanarayan(AbbVie (United States)), Jian Wang(Eli Lilly (United States)), Yong Yang(Eli Lilly (United States)), Hui-Rong Qian(Eli Lilly (United States)), Lee Lancashire(Thomson Reuters (United States)), Marina Bessarabova(Thomson Reuters (United States)), Yuri Nikolsky(Vavilov Institute of General Genetics), Cesare Furlanello(Fondazione Bruno Kessler), Marco Chierici(Fondazione Bruno Kessler), Davide Albanese(Fondazione Edmund Mach), Giuseppe Jurman(Fondazione Bruno Kessler), Samantha Riccadonna(Fondazione Edmund Mach), Michele Filosi(Fondazione Bruno Kessler), Roberto Visintainer(Fondazione Bruno Kessler), Ke Zhang(University of North Dakota), Jianying Li(National Institute of Environmental Health Sciences), Jui‐Hua Hsieh(National Institute of Environmental Health Sciences), Daniel Svoboda(SRA International (United States)), James C. Fuscoe(National Center for Toxicological Research), Youping Deng(Rush University Medical Center), Leming Shi(National Center for Toxicological Research), Richard S. Paules(National Institute of Environmental Health Sciences), Scott S. Auerbach(National Institute of Environmental Health Sciences), Weida Tong(National Center for Toxicological Research)

Nature Biotechnology

August 21, 2014

10.1038/nbt.3001

Cited by 550Open Access

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