Combining tumor genome simulation with crowdsourcing to benchmark somatic single-nucleotide-variant detection

ICGC-TCGA DREAM Somatic Mutation Calling Challenge participants(University of California, Santa Cruz), Adam D. Ewing(Ontario Institute for Cancer Research), Kathleen E. Houlahan(Ontario Institute for Cancer Research), Yin Hu(Sage Bionetworks), Kyle Ellrott(Ontario Institute for Cancer Research), Cristian Caloian(Ontario Institute for Cancer Research), Takafumi N. Yamaguchi(Ontario Institute for Cancer Research), J Christopher Bare(Ontario Institute for Cancer Research), Christine P’ng(Ontario Institute for Cancer Research), Daryl Waggott(Ontario Institute for Cancer Research), Veronica Y. Sabelnykova(Ontario Institute for Cancer Research), Michael Kellen(Sage Bionetworks), Thea Norman(Sage Bionetworks), David Haussler(Sage Bionetworks), Stephen Friend(Sage Bionetworks), Gustavo Stolovitzky(Oregon Health & Science University), Adam A Margolin(Oregon Health & Science University), Joshua M. Stuart(Ontario Institute for Cancer Research), Paul C. Boutros(Ontario Institute for Cancer Research)
Nature Methods
May 18, 2015
10.1038/nmeth.3407
Cited by 367Open Access
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