Using QIIME to Analyze 16S rRNA Gene Sequences from Microbial Communities
Justin Kuczynski(University of Colorado Boulder), Jesse Stombaugh(University of Colorado Boulder), William A. Walters(University of Colorado Boulder), Antonio González(University of Colorado Boulder), J. Gregory Caporaso(Northern Arizona University), Rob Knight(University of Colorado Boulder)
Cited by 749
Abstract
QIIME (canonically pronounced "chime") is a software application that performs microbial community analysis. It is an acronym for Quantitative Insights Into Microbial Ecology, and has been used to analyze and interpret nucleic acid sequence data from fungal, viral, bacterial, and archaeal communities. The following protocols describe how to install QIIME on a single computer and use it to analyze microbial 16S sequence data from nine distinct microbial communities.
Related Papers
No related papers found
Powered by citation graph analysis