David C. White

A current debate in ecology centers on the extent to which ecosystem function depends on biodiversity. Here, we provide evidence from a long-term field manipulation of plant diversity that soil microbial communities, and the key ecosystem processes that they mediate, are significantly altered by plant species richness. After seven years of plant growth, we determined the composition and function of soil microbial communities beneath experimental plant diversity treatments containing 1–16 species. Microbial community biomass, respiration, and fungal abundance significantly increased with greater plant diversity, as did N mineralization rates. However, changes in microbial community biomass, activity, and composition largely resulted from the higher levels of plant production associated with greater diversity, rather than from plant diversity per se. Nonetheless, greater plant production could not explain more rapid N mineralization, indicating that plant diversity affected this microbial process, which controls rates of ecosystem N cycling. Greater N availability probably contributed to the positive relationship between plant diversity and productivity in the N-limited soils of our experiment, suggesting that plant–microbe interactions in soil are an integral component of plant diversity's influence on ecosystem function.

n nature, microorganisms rarely exist as monocultures, but live in communities with other microbes. These communities play an important role in the biosphere, primarily in recycling biologically important elements. All the essential biochemical cycles of carbon, hydrogen, nitrogen, oxygen, and sulfur are mediated by communities of microorganisms. Consequently, understanding what microbes in a natural environment are doing, rather than simply which microbes are present, is important to understanding their role within ecosystems. Analytical techniques developed in the last decade offer insights into the nature of these important ecosytem components. Microbial communities include viruses, eubacteria, archaebacteria, fungi, protozoa, micrometazoa, and algae (Margulis et al. 1986). The communities exist throughout the biosphere and even occupy such extreme environments as boiling-hot springs (Brock 1978); the deep sea at high hydrostatic pressure (ca. 1200 atmospheres; Jannasch and Taylor 1984); the cold deserts of Antarctica in the pore spaces of sandstone (Friedmann 1982); deep subsurface Analytical techniques developed in the last decade offer insights into these important

Abstract Microbial decomposition processes are typically described using first‐order kinetics, and the effect of elevated temperature is modeled as an increase in the rate constant. However, there is experimental data to suggest that temperature increases the pool size of substrate C available for microbial respiration with little effect on first‐order rate constants. We reasoned that changes in soil temperature alter the composition of microbial communities, wherein dominant populations at higher temperatures have the ability to metabolize substrates that are not used by members of the microbial community at lower temperatures. To gain insight into changes in microbial community composition and function following soil warming, we used molecular techniques of phospholipid fatty acid (PLFA) and lipopolysaccharide fatty acid (LPS‐OHFA) analysis and compared the kinetics of microbial respiration for soils incubated from 5 to 25°C. Substrate pools for microbial respiration and the abundance of PLFA and LPS‐OHFA biomarkers for Gram‐positive and Gram‐negative bacteria differed significantly among temperature treatments, providing evidence for a shift in the function and composition of microbial communities related to soil warming. We suggest that shifts in microbial community composition following either large seasonal variation in soil temperature or smaller annual increases associated with global climate change have the potential to alter patterns of soil organic matter decomposition by a mechanism that is not considered by current simulation models.

Phospholipid, ester-linked fatty acid profiles showed changes in benthic prokaryotic community structure reflecting culture manipulations that were both quantitative and statistically significant. Fatty acid structures, including the position and cis/trans geometry of double bonds, were chemically verified by GC/MS after appropriate derivatization. The fatty acid profiles of independent flasks showed reproducible shifts when manipulated identically and significant differences when manipulated with different treatments. The absence of polyunsaturated fatty acids indicated that the consortia were predominantly prokaryotic. The prokaryotic consortia of different treatments could be differentiated by the proportions of cyclopropyl fatty acids and the proportions and geometry of monounsaturated fatty acids.