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Agnieszka Grabska‐Barwińska

Google DeepMind (United Kingdom)

Publishes on Neural dynamics and brain function, Domain Adaptation and Few-Shot Learning, Neural Networks and Applications. 28 papers and 11k citations.

28Publications
11kTotal Citations

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Top publicationsby citations

Overcoming catastrophic forgetting in neural networks
James Kirkpatrick, Razvan Pascanu, Neil C. Rabinowitz et al.|Proceedings of the National Academy of Sciences|2017
Cited by 7kOpen Access

The ability to learn tasks in a sequential fashion is crucial to the development of artificial intelligence. Until now neural networks have not been capable of this and it has been widely thought that catastrophic forgetting is an inevitable feature of connectionist models. We show that it is possible to overcome this limitation and train networks that can maintain expertise on tasks that they have not experienced for a long time. Our approach remembers old tasks by selectively slowing down learning on the weights important for those tasks. We demonstrate our approach is scalable and effective by solving a set of classification tasks based on a hand-written digit dataset and by learning several Atari 2600 games sequentially.

Effective gene expression prediction from sequence by integrating long-range interactions
Žiga Avsec, Vikram Agarwal, Daniel Visentin et al.|Nature Methods|2021
Cited by 1.2kOpen Access

How noncoding DNA determines gene expression in different cell types is a major unsolved problem, and critical downstream applications in human genetics depend on improved solutions. Here, we report substantially improved gene expression prediction accuracy from DNA sequences through the use of a deep learning architecture, called Enformer, that is able to integrate information from long-range interactions (up to 100 kb away) in the genome. This improvement yielded more accurate variant effect predictions on gene expression for both natural genetic variants and saturation mutagenesis measured by massively parallel reporter assays. Furthermore, Enformer learned to predict enhancer-promoter interactions directly from the DNA sequence competitively with methods that take direct experimental data as input. We expect that these advances will enable more effective fine-mapping of human disease associations and provide a framework to interpret cis-regulatory evolution.

Progress & Compress: A scalable framework for continual learning
Jonathan Schwarz, Jelena Luketina, Wojciech Marian Czarnecki et al.|arXiv (Cornell University)|2018
Cited by 292Open Access

We introduce a conceptually simple and scalable framework for continual learning domains where tasks are learned sequentially. Our method is constant in the number of parameters and is designed to preserve performance on previously encountered tasks while accelerating learning progress on subsequent problems. This is achieved by training a network with two components: A knowledge base, capable of solving previously encountered problems, which is connected to an active column that is employed to efficiently learn the current task. After learning a new task, the active column is distilled into the knowledge base, taking care to protect any previously acquired skills. This cycle of active learning (progression) followed by consolidation (compression) requires no architecture growth, no access to or storing of previous data or tasks, and no task-specific parameters. We demonstrate the progress & compress approach on sequential classification of handwritten alphabets as well as two reinforcement learning domains: Atari games and 3D maze navigation.